Giardia lamblia: GL50803_0016223
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Entry
GL50803_0016223 CDS
T01047
Name
(RefSeq) DNA-directed RNA polymerase subunit A'
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
gla
Giardia lamblia
Pathway
gla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GL50803_0016223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gla03021
]
GL50803_0016223
Enzymes [BR:
gla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GL50803_0016223
Transcription machinery [BR:
gla03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
GL50803_0016223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
5702502
NCBI-ProteinID:
XP_001709578
UniProt:
P25202
A8B4F1
LinkDB
All DBs
Position
4:712805..718030
Genome browser
AA seq
1741 aa
AA seq
DB search
MEPNRRLRYFRSEIPQPVTEHRFPKRVEKLVFSVLSSNALMKLSEVQITTPILYEHYPSP
ATNGVLDKRLGLSDKVGKCATCGKDTKMCIGHFGTISLALPVFHPGLINDARTMLSIVCP
FCSRVKISEADRLKYKVLNHKFSLAIVKEAQEQAKKQVNCPFCHAPSTICKKSQGFRVLR
EMHYEERATKILADVIKHQKDIEKIQELDQRLRNHVVDPIQALHILQKVPECDYPYLGIP
WQSRNVYASQQTPDSIASNDASQLFSRGSSKLLARTASRFIAQHQGISDRATRLTSHAFL
TRPQDVILTHIPVPPSCLRPSVQSGSGAGTTEDNLTSHLVRILTINDKLKEAMVSGAVAT
SKVYAKWDQLNMDVSLLYIGKIPGGVQPVKNKTDSGTKEGTGIIDRLKGKAGRFRSNLSG
KRVNFSGRTVISPNPYLSMQQVAIPRLIAQNLTFPEIVTSRNIRFLRELILNGKTYPGAN
EVLLLNDTIRYNPALKRLGIDVKQSRDMEAKAMELVSRCVDTFNLNSLCADLPELQAAIQ
HLVSESSNAINSELKAEDLPQNQPLFAKEVYDPAQKGESNNIDNNVCEIDELKLEDTADY
QVGESAGQASTVAVEQPPESRTVLKLNSIASLQLTNASSQHLSTFKLNTVSLLQKDRRGR
QAIANSLRPNDIVYRHLLPNDTLLFNRQPSLHRMSIMQFNAVIHENRTFSFNPVVCSPFN
ADFDGDEMNIFYMQGQEARAEAGILMGSHENIISPRHGECMIGLTQDFLTGIYLLSGKGI
FMTRQEYCQHVSYGCDGFGDATYGVSLYNYGREFIKSIHDRRGTEEDTVGFVKVPCLSQP
CIVYPRQLYSGKQVLSVLMKGNDFDSVNINLEHGDKTYKKDSDRRALSVNDDYIIIQNSE
HLVGRLTKTFLASSKNCIFYFLVQNYGPVSAARIMLRFAKVAARFLMNYGFTIGIDDVMP
SQRVLGKKEVIVQEGYEKAQEKIRDYESGKLEAIPGSTVQETLEATLNQILSNVRESCAQ
IALKELHFTNKPLIMSLCGSKGSPINIAQMIIILGQQSFGGSRAPDDFYTRSTPYFYHYS
KEPNAKGFILNSFYTGLLPFEFLAHARAGRDGVIDSACKTADTGYLQRRLVKCLEDLSVS
YDFTVRNSKKSVVQFRFGHDGFDPIKLEVGTGQCFDLDTLLRHIILLNRSQDLAEGAFPV
LLDRYKAEAELDVLLNKDFYGQEACLIERSNVTSYFQQSILPKLTTNTHIATTVAPALAA
SFLQTTLTKKDIDDFLRQVRRKYIRLNLEPGSPCGAVAAQSVGEPSTQMTLKSFHHAGLA
SMNITQGVPRLKEIVDGVVKISTPITTVELHVDVDKEELAATVTEKYLEKARMMKNIIEC
TYLGQISASIIECYSQSVCHIEVNLDMKIIADMGLAGIITVETVVASILHNDKAKKLVGQ
DQSSGSVSIHSATRFSVRPLTQSRDDLLFDIQSLKLLLPMIPVSGISTCSRAVINEYKEF
CQGATSSAPLTKYNLLVEGIGLQNILNVSGIDFTRTLSNNIVEVANTLGIEAAVATISNE
IKACMDSHGMAVDMRHIRLLADIMCFRGRVLGFTRFGLTKMKADSVIMLASFEKTGEHLF
NAALGNKVDEANGVTESIILGKPMSMGTGSFSLLQAPYFDEKTGKTIEYQPKQTTRFLGE
VLNKQYDEEVDAIVNAFWYDEKLYLTGAEAKAKLLRGRRHANKRSWSRGKERHASLKPKN
R
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaataggcgcttgcgatacttcaggtctgaaataccacagcccgtcacggag
caccgctttcccaagcgcgtggagaagcttgttttctcagtgttgtcatcgaatgccctc
atgaagttgtccgaggttcaaatcacaacaccgattctttacgagcactacccctcccca
gcaaccaacggggtgctggacaaaaggcttggtctatcggacaaagttggaaagtgcgcg
acttgcggcaaggacacgaaaatgtgcataggacactttggaacaatttccctggccctt
cctgtcttccatcctggcctaatcaacgatgcaagaactatgctctctattgtctgtccg
ttttgcagccgcgtaaagatctctgaagccgacagactcaagtacaaggttctaaaccac
aagttttctcttgccattgtcaaagaagcccaggagcaggcgaagaagcaggtgaactgc
ccgttctgccatgccccaagcacaatttgcaagaaatcacagggattccgggttctaaga
gagatgcattacgaagagcgtgctactaagattcttgcagacgtcatcaagcaccagaag
gatattgaaaagatccaagagcttgaccagcggcttcggaatcacgttgtggatccaata
caagcacttcacatcctccagaaggttcccgagtgcgactatccctacctaggaataccc
tggcagtcaagaaacgtgtatgcgtcccagcaaacccctgattctattgccagcaatgac
gctagccagttattttccagaggctcgtccaagctactcgcaagaacggcgagtcgcttt
attgcacagcatcaggggataagcgatcgtgccacacgtttaacatctcatgccttcctg
accaggcctcaagacgttattttgactcatatccctgtgcctccgtcttgcctccgcccc
tctgtacaatcagggtctggtgctggaacaacagaagacaacctcacttcccaccttgtt
cgcattttaaccattaacgacaaactgaaggaagcgatggtctccggggccgtagcaacc
tcaaaagtgtatgcaaaatgggatcagcttaatatggacgtttctctactatatataggg
aaaatcccaggcggcgtgcagcctgtgaagaataagacggattctggcaccaaagaggga
acggggattattgataggctgaagggaaaagcaggaagatttaggtctaacctcagcgga
aaacgggtcaacttcagtgggaggactgtcatttctccaaacccatacctttctatgcag
caggtggcaattccccgcctcatcgcccaaaaccttacctttccagagatagtaacgtct
cggaatattcgctttttacgtgagcttattcttaatgggaagacctatccgggagccaat
gaagttcttctattgaacgacaccattagatacaatccagcactcaagcggctcggaatt
gacgtgaagcaaagccgagatatggaggcaaaggctatggaactggtttcgcgctgtgtt
gacacgtttaatctcaattcgctttgtgcagacctcccagagctccaggctgccattcag
caccttgttagcgagtccagtaacgcaataaatagtgagctcaaggcagaagatctgcca
cagaaccagccgctttttgccaaggaggtgtatgatccagcacagaaaggtgaatcaaac
aatatagacaacaacgtttgtgagatagatgagctgaagcttgaagacacagctgattat
caggtaggtgagtcagctggccaagcttcaactgttgcagtcgagcagccaccggagtca
aggaccgttctaaaattgaactcaatcgcatcgttgcagcttaccaacgcgtcgtcacag
cacctatcgaccttcaaattaaacactgtttctctgctccaaaaagatcgccgtgggcgc
caggctattgccaatagtctcaggcccaacgacatagtttatcggcatttgcttcccaac
gatactttactctttaaccgtcagccgtcccttcacagaatgtcaatcatgcaatttaat
gcagttatacacgaaaaccgtactttttctttcaatccagttgtctgctctccatttaat
gcagatttcgacggggacgagatgaatatcttttacatgcaaggccaggaggcgcgtgct
gaagcggggatcctcatgggctctcacgaaaacattatttcgccacgacatggagaatgc
atgattgggctcacgcaggattttctaacaggaatctaccttctcagcggcaagggcatc
ttcatgacacgccaagagtactgccagcatgtgtcctatggctgtgatggctttggggat
gccacatatggtgttagtttgtacaactatggtcgcgagttcattaaaagcattcatgac
aggagaggtacagaggaagacaccgttgggtttgttaaggtcccctgtctttcacagcca
tgcatagtgtaccctcgacagctctatagcggaaagcaggtgctctctgttctcatgaag
ggaaacgattttgactctgtgaacatcaatctagagcacggtgacaagacatacaagaaa
gacagtgacaggcgtgcactctccgtcaacgatgactatatcatcatccagaattcagag
cacctcgtagggcgtctcaccaaaacgttcttggcatcgtccaagaattgcatattctat
tttttggtacagaactatggtcctgtttcagcagctcgcatcatgctccgcttcgccaag
gtggctgctagatttcttatgaactatggcttcaccataggcatagatgatgtaatgcca
tcccagcgagtgctgggtaagaaggaggtaatagttcaggaaggttatgagaaggcgcag
gaaaagatccgtgactacgaaagcggaaagctagaggctatacctgggtctactgtgcaa
gagacgcttgaagcaacacttaatcagatcctgtccaacgtccgcgagtcctgcgcccaa
atagctctcaaggagcttcacttcaccaataagcctctcatcatgtcactctgtgggagc
aagggaagccccatcaacatcgcccagatgattattattcttggacaacaatcctttgga
ggatctagggcgcctgatgacttctacactcgctcaactccatatttctatcattattca
aaagagccgaacgcaaaagggtttatcctgaacagcttttatactggcttgcttccattt
gaattcttagcgcacgcacgagcaggccgagatggggtcattgactctgcctgcaaaaca
gcagatacagggtatttgcagcgacggcttgttaagtgtctagaggatcttagtgtgtca
tatgattttaccgtgcgcaacagcaagaagagcgtggtgcaattccggtttggacacgat
gggtttgatccaataaagctcgaagttgggactgggcagtgcttcgatctagacactttg
ctcagacatataatcttgcttaacagatcacaagatctggccgagggggccttccctgtt
cttctggatcggtacaaggcagaggcagagctagacgtcctcctgaacaaagacttttac
ggccaggaggcttgtttgattgaaagaagcaatgtcactagctatttccagcagagcata
ttgccaaaattaactacgaacacacacatcgccactactgtggccccagcacttgcagca
tcattcctccaaacaacccttaccaaaaaggacatagatgattttctaaggcaggttcgg
cgaaagtacattcgcctgaatctggaaccgggatctccatgcggtgcggtggccgcccag
tcagtcggggagccctccactcagatgacactgaagtcatttcaccacgcaggcttagct
tccatgaacataacgcaaggggtcccacggctgaaagaaattgtcgatggtgtggtaaag
atatccacaccaatcacaaccgtggagctccatgtagatgtagataaggaggaactggca
gcaacggtgacagaaaaatatcttgaaaaagcgcgcatgatgaagaacatcatcgaatgc
acgtaccttggccagatatctgcatccattatcgagtgctacagccaatcagtttgccac
attgaagtcaatttggatatgaaaataatcgcagacatggggcttgctgggatcataacg
gtagagacggtggtagcgtccatcttacacaacgataaggcgaaaaagctagtaggacag
gaccaatcttctggatcggtaagcatacacagtgccacaaggttctctgtccgccccttg
acgcagtccagagacgacttgctcttcgacattcagagcttgaagttactccttccaatg
atacccgtttctggcatatctacttgtagtcgcgcggtgatcaatgagtataaagagttc
tgccaaggcgccacaagcagtgcaccgctaactaagtacaatctccttgtggagggtatt
gggttacaaaacatcctaaatgtcagtggaattgactttacacgcactctgtccaataat
atcgtagaggtagcaaatactcttgggatagaggctgcagtggccacaatatccaacgag
ataaaggcctgtatggatagccatggtatggccgtagatatgcgacatatccgccttctt
gcagacattatgtgcttcaggggccgagtgctaggctttacaaggtttggcttgacaaag
atgaaggccgattccgtaatcatgcttgcaagcttcgaaaagactggtgagcacctgttt
aatgctgcactagggaataaggttgacgaagcaaacggtgttacagagtctatcatacta
gggaaaccgatgagtatgggaacaggatcattctcgctattgcaggcaccgtactttgat
gaaaaaacgggcaagacgattgagtaccagcctaagcagacaacccgctttctaggggag
gtcctaaataaacagtacgatgaagaggtggacgctatagttaacgcgttttggtacgac
gaaaagctttatctaacgggtgcggaggctaaggcaaagcttcttcgtggaaggcggcat
gcaaataagcgctcctggtcgcggggaaaagaaagacacgctagtttgaagccaaagaat
cgataa
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integrated database retrieval system
