KEGG   Giardia lamblia: GL50803_0016264
Entry
GL50803_0016264   CDS       T01047                                 
Name
(RefSeq) WD40 repeat protein
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
gla  Giardia lamblia
Pathway
gla03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gla00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    GL50803_0016264
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gla03009]
    GL50803_0016264
Ribosome biogenesis [BR:gla03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    GL50803_0016264
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_Gbeta CFAP251_N Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_NOL10_N WDR90_beta-prop_4th Beta-prop_WDR75_1st PAC11 WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Utp12 Beta-prop_DCAF4 Beta-prop_ACSF4 ASA1 PEP5_VPS11_N NBCH_WD40 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_Aladin VPS11_N
Other DBs
NCBI-GeneID: 5698021
NCBI-ProteinID: XP_001705169
UniProt: A8BS78
LinkDB
Position
5:complement(<853770..>856895)
AA seq 1041 aa
MSRTYLRYEPDLACGVIATIGGCAVHPSGQKLFVAAHDSINVWSTTNGMRLSYYESCLDA
SINVIIHHSRKNVAAVGMSNGRVLAFDTDLPMVNLTHSFLPSNSAITALSFSDDGLFLFA
GTASSEIFVHDLVEGSITSKLTGGHSGPITRIATMGTKYLLSASRDMLVVLWDLSTRAKL
QTLVECNTEVRALCVYIEKKMSSSDSTQASESRPRKREKIDKELRTDKPVIPNHTMQPDS
VVDSQSDEPYTWFVFVGCADNSIHAWSTHALPPMRTILEILSEITEPNSLAFKYLALLHR
LGHHPDSQDSNAPVIASDLSNALNDDRARMIQNVDTIQEAKTLLDSDRKLLKYMGRMDKT
STEPTVSIKLVQTQLGAKLGEIVLALLVVSTKSVELYKVGSMEHVFKAAKRRLQKYARQK
VEKLLAACKIDKEAAQYEVEDTMKPHLLSESAVLLKSTSRAVQTNDFLTSSLLIKSPYGE
KLIDAAWIPKQNSVCLVSSLNFLKIFRVLVRDAANAAVKGVTAGGSGRGTEALRDSFYTY
EETLEIALQGHRHVIHHASLSFDDTIVATCSQGEVKLWNIRKFICITTISLPKTMKTPTR
VVILAGNKYSVVADSGGILGLINNIAAEVVDLVDAHAKRITDLQLSGGQLISSSEDGFVK
FWSFGVTEDGGVSLNLEREFDAGHSVGVIRIDSPQKHILCALYDNTVRIYFLDTLRFKLV
LYGHSMPITSMALSSTAEKLVTCSLDKTIRIWGLNFGECQKLIRFDSPFTDIQFIRDTRL
GLAASRDGRLSYWDLDSFLLISILGEGRSGSYFSRGHFGECTSLCVSSAGRFVISVGHDK
AIRQWIQTDDLINVRLEEQKRLHEAMTKEEEKTLGWEDPSKLQASRDGKNAGDILMEAVM
LVSNELASRPESKSCNDPTSHLATYGKPPLEYLLSVIRTEIRHEVLLDALSSITVESART
LLDLLSQMLDQKYQPADFIVRCATFLITRYFAKAANTQGLAVLIRKAQKLIHETLRKQEE
EARTALGCLEIMRSLEEGLTQ
NT seq 3126 nt   +upstreamnt  +downstreamnt
atgtccaggacctacctcaggtacgagccagaccttgcctgtggggtcatagccactatt
ggcggctgtgctgtgcatccatctggtcaaaagctcttcgtcgctgctcatgacagcatt
aacgtctggagcacaaccaacggtatgaggctatcgtattatgaaagctgccttgatgca
tccataaatgttatcattcaccactctagaaagaacgtcgctgctgttggaatgagcaat
ggccgtgtcctggcctttgataccgatctcccgatggttaatcttactcatagctttctg
ccctctaacagtgcgattacggcgcttagcttttcagatgacgggctcttcctcttcgca
ggaaccgcaagttcagaaatctttgtacacgatttagtcgaagggagcatcacatccaaa
ttgactggaggacactctggcccaattacgcggatagctactatgggaactaaatatctt
ctttcggcgtctcgtgatatgctagttgttctctgggatttgagcacgcgggcaaagctt
cagactctggtagaatgcaacactgaagttcgtgctctttgcgtgtacattgagaaaaag
atgagcagctctgacagtactcaagcttccgagtcacggcctagaaagagagaaaagatt
gacaaggaactcaggacagataagccggtaatacctaatcacactatgcagcctgacagt
gtcgtggactcacaaagtgacgagccatacacatggtttgtttttgttggctgtgcagac
aattcaattcacgcctggtccacgcacgcccttcctcctatgaggaccatcctcgagatt
ctctctgagattacagagcccaacagtcttgcatttaaataccttgcccttctgcatagg
cttgggcatcaccctgatagtcaagactcgaatgcgcctgtaattgcatcagacctctca
aatgctctcaacgatgaccgtgctagaatgattcaaaatgtagacacgattcaagaggcg
aagactcttctggatagcgacagaaagcttctcaagtatatgggtcgtatggacaagact
tccacggagcccactgtgtccattaagcttgtgcaaacgcagctaggcgccaaactaggc
gagattgtccttgcgcttctcgtggtgagcaccaaaagtgttgagctgtacaaggtaggc
tcgatggagcacgtgttcaaagcagcaaagcgtagacttcaaaagtatgctaggcaaaag
gttgagaaactgcttgctgcgtgtaagattgacaaggaggcagctcaatatgaggtagaa
gacaccatgaagccacacttgctctcagaaagtgctgttctattgaagtccacaagccgt
gctgttcagacaaatgactttcttacctcttcactgctcataaaatcaccttacggggaa
aagctgatagatgcagcttggattccaaagcagaacagcgtatgcctagttagctctctt
aatttcttaaaaatcttccgtgttttggttagagatgccgccaatgcggcggtgaaagga
gttactgcaggtggatctggaagaggcactgaggcacttcgggattccttttacacatat
gaagaaacgttggaaatagctctccaaggccacagacatgtcattcaccatgcatctcta
agtttcgatgacacaatcgttgcaacgtgtagtcagggagaggtgaagttgtggaacatc
cgaaagtttatctgcattacaactatctctcttcccaaaactatgaagacacccacacgg
gtagtaattcttgcagggaataagtactctgtcgtggcagatagtggcggaatactggga
ctgattaataatattgctgccgaggtcgttgatcttgtggatgctcacgccaagcgcatc
acagaccttcagctctcagggggacaactaatcagtagctctgaagacggatttgttaag
ttttggtcctttggagtaacagaggacggtggcgtttctctcaacttagagcgcgaattc
gatgctgggcattctgttggtgtgatacgtatcgacagtccgcaaaagcatattctttgt
gctctttatgacaacactgtacgtatctattttctagacacacttagattcaaactggta
ctgtatggccatagtatgcccattacatcaatggccctttcgtcaactgcagaaaagcta
gtcacgtgcagtctggacaagaccataagaatatggggcctcaacttcggagagtgtcag
aagctcatccgcttcgattccccgttcaccgacatccagttcatccgagatacccggctt
ggactagccgcttctcgagacggaagactctcctattgggacctcgatagcttccttttg
atttcaatcttgggagagggtagatctggctcctatttttccagaggacactttggcgag
tgcacatccctatgtgtcagcagtgcaggacgctttgtcatttctgtaggacacgataaa
gcaattcgacagtggatacaaacagatgatcttattaacgtccggctagaagagcagaag
cggttgcatgaagccatgacaaaggaggaggagaagaccctaggttgggaagatcccagc
aaattacaagcatcgcgtgacgggaagaatgcaggagacatcctcatggaagcggtaatg
cttgtaagcaacgagctggcttctaggcccgagtccaaatcttgtaacgatcccactagt
cacctggcaacgtacggaaagcctcctctagaatatcttctatccgttatacggactgag
attaggcacgaggttcttttggatgctctgtcgagcataacagtggagtctgcacgaacc
cttttagatctcctttcgcaaatgctcgatcagaagtatcaaccagcagactttatagtt
cgatgcgccacattcctaatcacccgttactttgctaaggccgctaacacccaggggctt
gccgtgctgatcaggaaggcgcagaaactcatccatgaaactctcagaaaacaggaggaa
gaggcgcggaccgccctgggatgcctggagatcatgcgctccctcgaagagggactaacc
cagtaa

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