Giardia lamblia: GL50803_0016264
Help
Entry
GL50803_0016264 CDS
T01047
Name
(RefSeq) WD40 repeat protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
gla
Giardia lamblia
Pathway
gla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GL50803_0016264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gla03009
]
GL50803_0016264
Ribosome biogenesis [BR:
gla03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GL50803_0016264
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_Gbeta
CFAP251_N
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_NOL10_N
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
PAC11
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
Utp12
Beta-prop_DCAF4
Beta-prop_ACSF4
ASA1
PEP5_VPS11_N
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_Aladin
VPS11_N
Motif
Other DBs
NCBI-GeneID:
5698021
NCBI-ProteinID:
XP_001705169
UniProt:
A8BS78
LinkDB
All DBs
Position
5:complement(<853770..>856895)
Genome browser
AA seq
1041 aa
AA seq
DB search
MSRTYLRYEPDLACGVIATIGGCAVHPSGQKLFVAAHDSINVWSTTNGMRLSYYESCLDA
SINVIIHHSRKNVAAVGMSNGRVLAFDTDLPMVNLTHSFLPSNSAITALSFSDDGLFLFA
GTASSEIFVHDLVEGSITSKLTGGHSGPITRIATMGTKYLLSASRDMLVVLWDLSTRAKL
QTLVECNTEVRALCVYIEKKMSSSDSTQASESRPRKREKIDKELRTDKPVIPNHTMQPDS
VVDSQSDEPYTWFVFVGCADNSIHAWSTHALPPMRTILEILSEITEPNSLAFKYLALLHR
LGHHPDSQDSNAPVIASDLSNALNDDRARMIQNVDTIQEAKTLLDSDRKLLKYMGRMDKT
STEPTVSIKLVQTQLGAKLGEIVLALLVVSTKSVELYKVGSMEHVFKAAKRRLQKYARQK
VEKLLAACKIDKEAAQYEVEDTMKPHLLSESAVLLKSTSRAVQTNDFLTSSLLIKSPYGE
KLIDAAWIPKQNSVCLVSSLNFLKIFRVLVRDAANAAVKGVTAGGSGRGTEALRDSFYTY
EETLEIALQGHRHVIHHASLSFDDTIVATCSQGEVKLWNIRKFICITTISLPKTMKTPTR
VVILAGNKYSVVADSGGILGLINNIAAEVVDLVDAHAKRITDLQLSGGQLISSSEDGFVK
FWSFGVTEDGGVSLNLEREFDAGHSVGVIRIDSPQKHILCALYDNTVRIYFLDTLRFKLV
LYGHSMPITSMALSSTAEKLVTCSLDKTIRIWGLNFGECQKLIRFDSPFTDIQFIRDTRL
GLAASRDGRLSYWDLDSFLLISILGEGRSGSYFSRGHFGECTSLCVSSAGRFVISVGHDK
AIRQWIQTDDLINVRLEEQKRLHEAMTKEEEKTLGWEDPSKLQASRDGKNAGDILMEAVM
LVSNELASRPESKSCNDPTSHLATYGKPPLEYLLSVIRTEIRHEVLLDALSSITVESART
LLDLLSQMLDQKYQPADFIVRCATFLITRYFAKAANTQGLAVLIRKAQKLIHETLRKQEE
EARTALGCLEIMRSLEEGLTQ
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggacctacctcaggtacgagccagaccttgcctgtggggtcatagccactatt
ggcggctgtgctgtgcatccatctggtcaaaagctcttcgtcgctgctcatgacagcatt
aacgtctggagcacaaccaacggtatgaggctatcgtattatgaaagctgccttgatgca
tccataaatgttatcattcaccactctagaaagaacgtcgctgctgttggaatgagcaat
ggccgtgtcctggcctttgataccgatctcccgatggttaatcttactcatagctttctg
ccctctaacagtgcgattacggcgcttagcttttcagatgacgggctcttcctcttcgca
ggaaccgcaagttcagaaatctttgtacacgatttagtcgaagggagcatcacatccaaa
ttgactggaggacactctggcccaattacgcggatagctactatgggaactaaatatctt
ctttcggcgtctcgtgatatgctagttgttctctgggatttgagcacgcgggcaaagctt
cagactctggtagaatgcaacactgaagttcgtgctctttgcgtgtacattgagaaaaag
atgagcagctctgacagtactcaagcttccgagtcacggcctagaaagagagaaaagatt
gacaaggaactcaggacagataagccggtaatacctaatcacactatgcagcctgacagt
gtcgtggactcacaaagtgacgagccatacacatggtttgtttttgttggctgtgcagac
aattcaattcacgcctggtccacgcacgcccttcctcctatgaggaccatcctcgagatt
ctctctgagattacagagcccaacagtcttgcatttaaataccttgcccttctgcatagg
cttgggcatcaccctgatagtcaagactcgaatgcgcctgtaattgcatcagacctctca
aatgctctcaacgatgaccgtgctagaatgattcaaaatgtagacacgattcaagaggcg
aagactcttctggatagcgacagaaagcttctcaagtatatgggtcgtatggacaagact
tccacggagcccactgtgtccattaagcttgtgcaaacgcagctaggcgccaaactaggc
gagattgtccttgcgcttctcgtggtgagcaccaaaagtgttgagctgtacaaggtaggc
tcgatggagcacgtgttcaaagcagcaaagcgtagacttcaaaagtatgctaggcaaaag
gttgagaaactgcttgctgcgtgtaagattgacaaggaggcagctcaatatgaggtagaa
gacaccatgaagccacacttgctctcagaaagtgctgttctattgaagtccacaagccgt
gctgttcagacaaatgactttcttacctcttcactgctcataaaatcaccttacggggaa
aagctgatagatgcagcttggattccaaagcagaacagcgtatgcctagttagctctctt
aatttcttaaaaatcttccgtgttttggttagagatgccgccaatgcggcggtgaaagga
gttactgcaggtggatctggaagaggcactgaggcacttcgggattccttttacacatat
gaagaaacgttggaaatagctctccaaggccacagacatgtcattcaccatgcatctcta
agtttcgatgacacaatcgttgcaacgtgtagtcagggagaggtgaagttgtggaacatc
cgaaagtttatctgcattacaactatctctcttcccaaaactatgaagacacccacacgg
gtagtaattcttgcagggaataagtactctgtcgtggcagatagtggcggaatactggga
ctgattaataatattgctgccgaggtcgttgatcttgtggatgctcacgccaagcgcatc
acagaccttcagctctcagggggacaactaatcagtagctctgaagacggatttgttaag
ttttggtcctttggagtaacagaggacggtggcgtttctctcaacttagagcgcgaattc
gatgctgggcattctgttggtgtgatacgtatcgacagtccgcaaaagcatattctttgt
gctctttatgacaacactgtacgtatctattttctagacacacttagattcaaactggta
ctgtatggccatagtatgcccattacatcaatggccctttcgtcaactgcagaaaagcta
gtcacgtgcagtctggacaagaccataagaatatggggcctcaacttcggagagtgtcag
aagctcatccgcttcgattccccgttcaccgacatccagttcatccgagatacccggctt
ggactagccgcttctcgagacggaagactctcctattgggacctcgatagcttccttttg
atttcaatcttgggagagggtagatctggctcctatttttccagaggacactttggcgag
tgcacatccctatgtgtcagcagtgcaggacgctttgtcatttctgtaggacacgataaa
gcaattcgacagtggatacaaacagatgatcttattaacgtccggctagaagagcagaag
cggttgcatgaagccatgacaaaggaggaggagaagaccctaggttgggaagatcccagc
aaattacaagcatcgcgtgacgggaagaatgcaggagacatcctcatggaagcggtaatg
cttgtaagcaacgagctggcttctaggcccgagtccaaatcttgtaacgatcccactagt
cacctggcaacgtacggaaagcctcctctagaatatcttctatccgttatacggactgag
attaggcacgaggttcttttggatgctctgtcgagcataacagtggagtctgcacgaacc
cttttagatctcctttcgcaaatgctcgatcagaagtatcaaccagcagactttatagtt
cgatgcgccacattcctaatcacccgttactttgctaaggccgctaacacccaggggctt
gccgtgctgatcaggaaggcgcagaaactcatccatgaaactctcagaaaacaggaggaa
gaggcgcggaccgccctgggatgcctggagatcatgcgctccctcgaagagggactaacc
cagtaa
DBGET
integrated database retrieval system