Giardia lamblia: GL50803_0018713
Help
Entry
GL50803_0018713 CDS
T01047
Name
(RefSeq) putative U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
gla
Giardia lamblia
Pathway
gla03018
RNA degradation
gla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GL50803_0018713
09123 Folding, sorting and degradation
03018 RNA degradation
GL50803_0018713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gla03019
]
GL50803_0018713
03041 Spliceosome [BR:
gla03041
]
GL50803_0018713
Messenger RNA biogenesis [BR:
gla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GL50803_0018713
mRNA degradation factors
5'-3' decay
Lsm complex
GL50803_0018713
Spliceosome [BR:
gla03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
GL50803_0018713
Complex C
U2 snRNP components
GL50803_0018713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
DUF6338
Motif
Other DBs
NCBI-GeneID:
5697865
NCBI-ProteinID:
XP_001705015
UniProt:
A8BT30
LinkDB
All DBs
Position
5:complement(3511240..3511563)
Genome browser
AA seq
107 aa
AA seq
DB search
MLYLTFLSKLVGRKVYVELKSGMQMHGVLLASDNFANLSLDNPVIYGSDISFTHVSGGRR
VFIRGSAIQFLYLNDVEGDESLSLRALADDSRINWAKEHHSQENLAT
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgctttacttgacattcctctctaagctcgtgggacgtaaggtatacgtggagctcaag
tctgggatgcagatgcacggagtacttctagcttctgacaactttgccaacctgtctctg
gataaccccgtcatctatggctctgacatctcctttacacacgtttctggcggccgaaga
gtattcatccgagggtctgcaattcaatttctttatctgaatgatgtggagggtgatgag
tcgttgtccctccgtgcactggccgatgactcgcgcattaactgggccaaagaacaccac
agccaagagaacctggctacctag
DBGET
integrated database retrieval system
