KEGG   Giardia lamblia: GL50803_001890
Entry
GL50803_001890    CDS       T01047                                 
Name
(RefSeq) 3' exoribonuclease, putative
  KO
K12590  exosome complex component RRP46
Organism
gla  Giardia lamblia
Pathway
gla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GL50803_001890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gla03019]
    GL50803_001890
Messenger RNA biogenesis [BR:gla03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     GL50803_001890
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PDEase_II
Other DBs
NCBI-GeneID: 5698695
NCBI-ProteinID: XP_001705799
UniProt: A8BNT9
LinkDB
Position
5:539676..540461
AA seq 261 aa
MARELRPDGREKLEHREPTVLFNCISTSTGSVRFRLGGTDLIASVYLDAPQNSPFKLTVE
ALPTVADAYRLTSNIRVLVGSVLSSVVLSEQKTCSLCVSGRSLLVLSLLILSDDGSAVAS
ACNAILLTLMAIGVTLPYVPCAVSLGFTRTSDSRTMLIDPSKTEERSLSGALTAVLDSIT
GDVLACVHSTAIHSTELRDILVLASSCSDVLSKNLFDHLSPTKAGVPLGDIVSRVEPFPK
RQADHPTVGRYLKVPNPLEDT
NT seq 786 nt   +upstreamnt  +downstreamnt
atggctcgtgagctacgcccagatggacgagaaaaactggagcaccgggagccgactgtg
ctcttcaactgtatatctacctcaacaggatccgtgcggtttcgccttggcggcacagat
cttattgcctctgtctacctcgatgcacctcagaactcaccattcaagcttactgttgaa
gcgctgcccacagtcgcagatgcttatcggcttacttcgaatatacgcgtattagtaggt
agcgtcttgtccagtgtagttttatctgagcaaaagacctgttctctctgtgtttcgggc
cgaagcttacttgtgctttcactccttatcttatctgacgacggtagtgcagtggcctct
gcgtgtaatgccatattgcttacgctaatggcgataggagtgacgctcccatatgtccca
tgtgcggtgtctctaggcttcaccagaacatcagactccagaacaatgctcatagatccc
tcaaagactgaggaaagaagcctcagtggagcccttacagccgttctagattcaatcaca
ggagacgtcttggcctgcgttcactcgacagccatccattccacagagcttcgggacatt
cttgtattggcgagctcctgcagcgatgtcctgagtaaaaacctttttgatcacttgtca
ccgaccaaagcaggggtgcctctgggggatattgtgagtagggtggagccgttcccgaaa
cgccaagcagaccatccaacggttggaaggtacctcaaggtaccaaatccgctcgaggac
acttag

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