KEGG   Giardia lamblia: GL50803_003036
Entry
GL50803_003036    CDS       T01047                                 
Name
(RefSeq) RNA polymerase II subunit Rpb11
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
gla  Giardia lamblia
Pathway
gla03020  RNA polymerase
gla03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GL50803_003036
  09124 Replication and repair
   03420 Nucleotide excision repair
    GL50803_003036
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gla03021]
    GL50803_003036
   03400 DNA repair and recombination proteins [BR:gla03400]
    GL50803_003036
Transcription machinery [BR:gla03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     GL50803_003036
DNA repair and recombination proteins [BR:gla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      GL50803_003036
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L s48_45
Other DBs
NCBI-GeneID: 5701564
NCBI-ProteinID: XP_001708649
UniProt: E2RTX5 Q8MUU4
LinkDB
Position
2:1198721..1199116
AA seq 131 aa
MDNVPDRYKTLIPDRRSAELLEVYKVGTANALEFQIPYQDYTIGHILRKELLSMPQVTFA
GMKTPHPLESKIVIRLQTNPSGFLSDTIQATPENCFQSALTKITESMELIKKTFMAAVDD
YSIMHTHPGSI
NT seq 396 nt   +upstreamnt  +downstreamnt
atggacaatgtcccggatcggtacaaaacactcataccagaccgccggagcgcagagctc
ttggaggtgtacaaagtcggcactgcgaacgctctggagttccagataccttaccaggac
tataccatcggtcacattcttcgcaaggagctcctttccatgcctcaagtgacgttcgca
gggatgaagacaccccatccgttggagtccaagatcgtcatccgtcttcagacgaacccg
tcggggtttctgtctgacacaatccaggccacgcccgagaactgcttccagagcgccctt
acaaagataacagagtctatggagctgataaagaaaacctttatggctgctgtggacgac
tatagtatcatgcacacccacccagggtccatctaa

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