Giardia lamblia: GL50803_003281
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Entry
GL50803_003281 CDS
T01047
Name
(RefSeq) Histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
gla
Giardia lamblia
Pathway
gla03082
ATP-dependent chromatin remodeling
gla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GL50803_003281
03083 Polycomb repressive complex
GL50803_003281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gla03036
]
GL50803_003281
Enzymes [BR:
gla01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
GL50803_003281
Chromosome and associated proteins [BR:
gla03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
GL50803_003281
HDAC complexes
Sin3A-HDAC complex
GL50803_003281
BRAF-HDAC complex
GL50803_003281
REST complex
GL50803_003281
SHIP complex
GL50803_003281
MiDAC complex
GL50803_003281
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
GL50803_003281
Heterochromatin formation proteins
Other heterochromatin formation proteins
GL50803_003281
Chromatin remodeling factors
NuRD complex
GL50803_003281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
DUF5491
Motif
Other DBs
NCBI-GeneID:
5697782
NCBI-ProteinID:
XP_001704886
UniProt:
E2RU63
Q5XTS3
LinkDB
All DBs
Position
4:complement(2345974..2347377)
Genome browser
AA seq
467 aa
AA seq
DB search
MPPSKPSFFYNPLFPTFYFGLHHPMKPFRIALVNELILAYGLDEHLNYYTPRDATFQDMA
LYHTPDYIRFLKNITPETLSKFQDLAKRYNITEDCPVFSGLYDYCSMTVGASVNACAHLN
HGMCDVALNWMGGFHHAKASEASGFCYANDLVLGILELLKVHERVLYVDIDIHAGDGVEE
AFYTTNRVLTLSFHKYDTDFFPGTGNLFDNGADQGKGYAINFPLKDAIDDDTFIYIFGSV
VKDVMCCYDPQAVVLQCGADSLAGDRLGVFNVTLKGHGECVKILYQYTQAKGIPLLLTGG
GGYTARSAAKCWTYETSLVCNQVLSEQIPANQFYEYYGPDYSLLVPRINLPNQNTRQDIE
QKLTHIRQKLREIQPANACGGSSTLTSVMPASVETSKEMLQGKDRDYYGGRPLAEDEDGL
GQHEKEGVSEGTRERARQNRDEPTVVVMGQNGFVDGALRSEAGLDEN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgccgccttcaaaaccctccttcttctacaacccactcttccccaccttctactttggg
ctgcatcatccgatgaagccattcaggattgccttggtgaatgagcttattttagcatac
ggcttggatgagcatttgaactactatacacctagagacgccacttttcaggacatggct
ctttaccacacccctgattatatacgctttctgaaaaatatcacgcctgagactctttct
aagttccaggaccttgccaagagatataacattaccgaagactgccccgtgttctctggg
ctctacgactactgtagcatgacagtgggtgcttctgttaatgcatgtgctcacttgaat
catgggatgtgcgatgtagccctcaactggatgggcgggttccaccatgcaaaggcttct
gaagcctctgggttttgttatgccaatgatcttgtcttagggatacttgagctcttgaag
gtacacgagcgtgtgctgtatgtagatattgacatccatgccggagatggagtcgaggag
gccttctataccacaaatcgggttttgactctgtcattccacaagtacgacacagacttc
tttccgggcaccggcaatctgtttgataatggagctgaccaagggaaagggtacgccatt
aattttccgctgaaagacgccatcgatgatgacacattcatctacatctttggaagcgtg
gtaaaggatgtgatgtgttgctatgatccacaagcagttgtcttgcagtgtggagcagac
tcgctggcaggcgatcgactaggggtcttcaatgtcaccttgaaaggtcacggggagtgt
gttaagattctgtatcagtatacgcaagcgaagggcataccgcttctcttaacaggtggg
ggtgggtatacagcgcgttctgccgccaagtgttggacatatgagacatcactcgtctgt
aaccaggtcctgtccgaacagataccagcaaatcagttctacgagtactatggccccgat
tattcgctgcttgttccacgcatcaatcttcccaatcagaacacaagacaggacattgag
cagaagctcacacacattcgacaaaagctcagagaaatacaacccgcaaacgcatgtggt
ggtagcagcacgttgacaagcgttatgcctgcttctgtggagactagtaaggagatgcta
caagggaaagatagagactactatggagggcggccactggccgaagatgaagatgggttg
ggtcagcatgagaaagaaggtgttagcgagggtacacgagaacgggctcggcagaatcgg
gatgagccaaccgtagttgttatgggtcaaaatggttttgttgacggcgccttgcgaagt
gaagcggggttagatgagaactag
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integrated database retrieval system