KEGG   Giardia lamblia: GL50803_003281
Entry
GL50803_003281    CDS       T01047                                 
Name
(RefSeq) Histone deacetylase
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gla  Giardia lamblia
Pathway
gla03082  ATP-dependent chromatin remodeling
gla03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GL50803_003281
   03083 Polycomb repressive complex
    GL50803_003281
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gla03036]
    GL50803_003281
Enzymes [BR:gla01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     GL50803_003281
Chromosome and associated proteins [BR:gla03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     GL50803_003281
   HDAC complexes
    Sin3A-HDAC complex
     GL50803_003281
    BRAF-HDAC complex
     GL50803_003281
    REST complex
     GL50803_003281
    SHIP complex
     GL50803_003281
    MiDAC complex
     GL50803_003281
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     GL50803_003281
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    GL50803_003281
  Chromatin remodeling factors
   NuRD complex
    GL50803_003281
SSDB
Motif
Pfam: Hist_deacetyl DUF5491
Other DBs
NCBI-GeneID: 5697782
NCBI-ProteinID: XP_001704886
UniProt: E2RU63 Q5XTS3
LinkDB
Position
4:complement(2345974..2347377)
AA seq 467 aa
MPPSKPSFFYNPLFPTFYFGLHHPMKPFRIALVNELILAYGLDEHLNYYTPRDATFQDMA
LYHTPDYIRFLKNITPETLSKFQDLAKRYNITEDCPVFSGLYDYCSMTVGASVNACAHLN
HGMCDVALNWMGGFHHAKASEASGFCYANDLVLGILELLKVHERVLYVDIDIHAGDGVEE
AFYTTNRVLTLSFHKYDTDFFPGTGNLFDNGADQGKGYAINFPLKDAIDDDTFIYIFGSV
VKDVMCCYDPQAVVLQCGADSLAGDRLGVFNVTLKGHGECVKILYQYTQAKGIPLLLTGG
GGYTARSAAKCWTYETSLVCNQVLSEQIPANQFYEYYGPDYSLLVPRINLPNQNTRQDIE
QKLTHIRQKLREIQPANACGGSSTLTSVMPASVETSKEMLQGKDRDYYGGRPLAEDEDGL
GQHEKEGVSEGTRERARQNRDEPTVVVMGQNGFVDGALRSEAGLDEN
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgccgccttcaaaaccctccttcttctacaacccactcttccccaccttctactttggg
ctgcatcatccgatgaagccattcaggattgccttggtgaatgagcttattttagcatac
ggcttggatgagcatttgaactactatacacctagagacgccacttttcaggacatggct
ctttaccacacccctgattatatacgctttctgaaaaatatcacgcctgagactctttct
aagttccaggaccttgccaagagatataacattaccgaagactgccccgtgttctctggg
ctctacgactactgtagcatgacagtgggtgcttctgttaatgcatgtgctcacttgaat
catgggatgtgcgatgtagccctcaactggatgggcgggttccaccatgcaaaggcttct
gaagcctctgggttttgttatgccaatgatcttgtcttagggatacttgagctcttgaag
gtacacgagcgtgtgctgtatgtagatattgacatccatgccggagatggagtcgaggag
gccttctataccacaaatcgggttttgactctgtcattccacaagtacgacacagacttc
tttccgggcaccggcaatctgtttgataatggagctgaccaagggaaagggtacgccatt
aattttccgctgaaagacgccatcgatgatgacacattcatctacatctttggaagcgtg
gtaaaggatgtgatgtgttgctatgatccacaagcagttgtcttgcagtgtggagcagac
tcgctggcaggcgatcgactaggggtcttcaatgtcaccttgaaaggtcacggggagtgt
gttaagattctgtatcagtatacgcaagcgaagggcataccgcttctcttaacaggtggg
ggtgggtatacagcgcgttctgccgccaagtgttggacatatgagacatcactcgtctgt
aaccaggtcctgtccgaacagataccagcaaatcagttctacgagtactatggccccgat
tattcgctgcttgttccacgcatcaatcttcccaatcagaacacaagacaggacattgag
cagaagctcacacacattcgacaaaagctcagagaaatacaacccgcaaacgcatgtggt
ggtagcagcacgttgacaagcgttatgcctgcttctgtggagactagtaaggagatgcta
caagggaaagatagagactactatggagggcggccactggccgaagatgaagatgggttg
ggtcagcatgagaaagaaggtgttagcgagggtacacgagaacgggctcggcagaatcgg
gatgagccaaccgtagttgttatgggtcaaaatggttttgttgacggcgccttgcgaagt
gaagcggggttagatgagaactag

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