Giardia lamblia: GL50803_005786
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Entry
GL50803_005786 CDS
T01047
Name
(RefSeq) putative Ribosome biogenesis protein NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
gla
Giardia lamblia
Pathway
gla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GL50803_005786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gla03009
]
GL50803_005786
Enzymes [BR:
gla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
GL50803_005786
Ribosome biogenesis [BR:
gla03009
]
Eukaryotic type
90S particles
Other 90S particles
GL50803_005786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
5702911
NCBI-ProteinID:
XP_001709987
UniProt:
A8B2J7
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All DBs
Position
3:1047871..1048566
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AA seq
231 aa
AA seq
DB search
MTDSQVFQPKFDSGAASTSRLIVILEGAFLETVKNKDRYQLLNVDDHFTILRKHKRQADI
ARPDITHQTLLTLLDSPLNKAGLLEVWIHTENKVLIKIDPTVRIPRTFKRFCGLIVQLLY
KLTIRAEDSNRKLLQVVKADLKKHLPPDIRIVLLSRVAGKPQSMKQLATELTGGLSPPDC
KPVGVIIGAIAHGHVSADYATDRACISQYALSAAAVAARVCGAFEDLWGIH
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcgcaggtgttccagcccaaatttgacagtggagcagctagcacatctcgc
ctaatagtcattttagagggggccttcctagaaacagtcaagaacaaggatagatatcag
cttttgaacgttgacgatcattttaccattctgcgcaagcacaagcgtcaggcagatatt
gcgcgccccgatattacacaccagacactactaacccttttggactctccactgaacaag
gccggcctactagaagtgtggatacataccgagaacaaagtcctgatcaagattgacccc
accgtccgtataccgcgtacattcaagcgcttttgtggcctcatcgtccaactgttatac
aagcttactattcgtgcagaggacagcaaccggaagctcctgcaagtcgtcaaagcagac
cttaagaagcatcttccgccagacatacggatcgtgctcctcagcagagttgctgggaag
cctcaatcgatgaagcaacttgccaccgaacttacaggagggctttcccctccggactgt
aagccagtgggcgtgatcattggggccattgcacatggccatgtaagcgcagactatgcc
accgatcgagcatgcatttcacaatacgccctttctgctgcagcagtggctgcccgcgtg
tgtggtgcatttgaggacttgtggggaattcactaa
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