Giardia lamblia: GL50803_006702
Help
Entry
GL50803_006702 CDS
T01047
Name
(RefSeq) tRNA pseudouridine13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gla
Giardia lamblia
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gla03016
]
GL50803_006702
Enzymes [BR:
gla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GL50803_006702
Transfer RNA biogenesis [BR:
gla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GL50803_006702
Prokaryotic type
GL50803_006702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF5506
DUF7537
Motif
Other DBs
NCBI-GeneID:
5697137
NCBI-ProteinID:
XP_001704282
UniProt:
A8BXT0
LinkDB
All DBs
Position
5:complement(407662..409698)
Genome browser
AA seq
678 aa
AA seq
DB search
MTLNLTPYAPDIGVTCLLTDQVTPVPALIKLYYSDFIVRELDLDGTCVRLKETAVPVEPE
LDAYNYYLSEPEVKRVQLSAAIQTAPELDYLSAENRELLAAIYSAPSSVSLETTSPRFFP
MPSSKEARRSVHNMLNSMNRIDIATSTVIDPGEGDGEQTYRLKIQPQKPRVPRPSEKYTH
FVLEKAGLDTMQAIISMVAKMLPQFRCKVNDFTYRGTKDKRGATVQRVCAKGVWPSVLSA
TSINSSGMYLQVGDFSFSSEPLHLGAHLGNSFELILRGIPHTATENIGRRLSTLKSQGFI
NYFGYQRFGSRSTGTHRIGAAILSGQYSDALWMIVKSSIECKLKSTVTICSSFKDVMISI
ANKDAKMFEDSLPKLLDDAGKSMGAFTSTLRLVKEAKDPLRALLKHVPRSMQTMYIHAFQ
AYLFNLATSRCITRIKNEIANGKRKVETNCLLLNDPVYVRSATTRIGDKVHLVSTDDLIK
GTYALNDLAIPLLGTKTTQLLADAASKFPQSLLADVYEAYKDALLPNGLSFDFLSTMTRR
IIVPKELSSLLRAFVPVGDIRLLIVMPKDLEMCWIGHASLTDILGITDIDILAGKQPHVF
SEVPTMEPFSTISDSKTDYRSLALRFSLPSSAYATEFLRELLGTTVDPDSQKSLLAHYKI
NITNATELDDPEWLQQLE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaccctaaatctgaccccctatgcacctgacataggcgtaacatgcctcctaactgat
caggtaacacctgttccagcccttattaagctgtactatagtgacttcatcgttcgagaa
ctggatctagatggaacatgtgtaaggctgaaggaaacagcagttccggttgaaccagaa
ttggatgcatacaactactatctttcagagccggaagtaaaacgtgttcagctatctgca
gccatacaaactgcgcctgagcttgactatctctcggcagaaaatcgcgagctgctagca
gcaatttattccgccccctcttccgtttcgctagagaccacatcaccacgcttcttcccc
atgccatcaagcaaagaggcaagaagatctgtgcacaatatgctaaatagtatgaatcgc
attgacattgccacaagtactgtgatagacccaggggaaggtgatggagagcaaacatac
agattgaaaattcagcctcagaagccaagggttccgcgcccttctgagaaatacacccat
tttgttctggagaaagcaggtctagataccatgcaagctattataagcatggtagctaag
atgctcccgcagtttcggtgtaaggtgaacgacttcacatacagaggcacgaaggacaag
cgtggagcgactgtccagagagtctgtgcaaaaggtgtttggccatctgtactgagtgct
acgtctatcaatagttctggcatgtacctgcaggttggggacttctccttttcttcggag
cctctgcatttaggagctcatttgggcaattcgtttgaattgatattgcgagggattcct
cacacagcaacggaaaatattggtcgtagattgtctaccttaaaatcacagggatttatc
aattactttggctatcagcgcttcggttctagaagcaccggaacacatcgtattggagca
gcaattctatcgggtcagtattccgatgcattatggatgatagtcaagagctccatagag
tgtaagcttaaatctacagtcactatctgcagctcattcaaggatgtgatgatctctata
gctaataaagacgccaagatgtttgaggacagcttaccaaagttgttggatgatgctgga
aagtctatgggtgcctttacttcgactcttcgcctagtgaaggaggcaaaagacccgctg
agagctcttctaaagcacgttcccaggtcgatgcaaactatgtacattcatgcatttcag
gcatatctgtttaacctggctacttcacgttgtataacgagaattaagaatgaaatagcc
aatggaaagagaaaagtggagacaaactgtcttctcctgaacgatcccgtatacgtcagg
agcgctacaactagaataggggacaaagttcacctagttagtacggacgatcttatcaag
ggaacgtatgctcttaatgatcttgccattcctctattgggcaccaaaacaacacagtta
ctagcagatgctgcatctaaatttccccagtctctgctagctgatgtctacgaggcatat
aaggatgcgttactccccaatgggttgtcttttgattttctttccactatgactcggcgc
atcatcgtccccaaagagctttcctctttgcttcgcgcatttgtaccagtgggagacata
cgtttgttaatagtgatgccaaaagatctagaaatgtgctggattgggcatgcgtctctt
acagacattttaggaataacagatatagacattctagcagggaaacagccccatgttttc
tcggaagtacctacaatggaaccattttcaaccatcagcgatagtaagactgattatagg
tccttagcattgcgcttttcgttaccttcttctgcatatgccacagagtttcttagagag
ctcctaggaacaactgtggatccagactcccagaagagccttttggcgcattataagatc
aatattaccaatgcaaccgagctggatgatccagagtggcttcaacaattagagtag
DBGET
integrated database retrieval system
