Giardia lamblia: GL50803_0087022
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Entry
GL50803_0087022 CDS
T01047
Name
(RefSeq) RNA helicase
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
gla
Giardia lamblia
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gla03400
]
GL50803_0087022
Enzymes [BR:
gla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GL50803_0087022
DNA repair and recombination proteins [BR:
gla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GL50803_0087022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
ResIII
SNRNP200_wHTH
AAA_22
DEXQc_Suv3
Na_Pi_cotrans
Motif
Other DBs
NCBI-GeneID:
5697298
NCBI-ProteinID:
XP_001704428
UniProt:
A8BWJ2
LinkDB
All DBs
Position
4:complement(1542111..1549376)
Genome browser
AA seq
2421 aa
AA seq
DB search
MESHTLLKLLSPYAQRMQITDEEMLLAVMQILASPSSNEEIKNSLLELLSYSVLDDPLFN
DILSNREDYVEMFTLLCPGTSLGQLSSDTQAALSTQAAKQETLPNRISINIKSKQASQQS
DVHPYVSEENLEDATHLSSLITIPSTITQTIYIPHVPVLSTSTTSSLRPVSDLPLEYQKV
FPKRITHFNRIQSESYEVLFNNSCNVLLCAPTGAGKTVCALLCMLRAFSSDLLLPSDDKP
KPTQHIITFSNAPVIPKQATTTPPSSAKSTQLVVYLTPMKALASEMTTTFTEQLEKLGLT
VLECTGDEAPPQAKLLEANLLICTPEKWDVLTRKPVGEVSLIQRQTLLIIDEIHLLGVSE
RGPVLESIIMRTLQYSETTQKFMRIVGISATIPNYKDVAEFLHVPPAGLLYYGQEYRPVP
LAQTIIGIKPQLTVNQEKLNRLTTQSSSDPSDPLQLSDVYYYMQKYAPDELNNQPLSKQM
RAFCSVSRPHCFPVVKGLVESEHEILEKFQSKMTHVLSKRTDSQASTSGSMSNMRGYSSH
DVMDIVTVSLVKEQLLQRQNQVLVFVHSRMGTQILARLIGDMLRALIQQGAIPTPDISSN
ILRSISSGKQDDLSQLIGCGVAYHNAGMEKSQRQTVEQLFRDSKIRVVCCTATLAWGVNM
PCSTVIIRGTDIFSAGVAGQITKATDIDVLDIQQIFGRAGRPQYTASGEVGHGIILTDIE
KLDTFVRLLNNESPIESHMQQALPDILNAEVILGNVSSVTDCVSLLRRSFLATRVVNMPW
LYGARITKSDSRGNGNLFTSVSLDHTLRECVMNAILNLASNKVVTLDTDNEHLFPTEIGR
ICSYYYVSFRNFCRFISLIKDSVVGRVTHDTLLGCLCECSDFSKFIMRKSELEELSLLSG
DSFEYLGFYSNDTTSDRRSNKVSASEAFSQKDLRKFRDSLQSQSNSQAICRLNITNTADI
DSAPYKVNVILQSFISQWRLRVQSLATDQRLCVTVAPRILRAFAEASLVLQRVSEALKLY
DLASSIEYQRWFQTSLPFWPIVRSPVGSMEHIKNHYLVTLEVRKRQGVGEILTEKLIIDF
EHHKNAEDFPSPNSFFSMTVDDISTYIYDRSQAKKLHESIAFVPRLITKASLYPVSNRIL
RLSLSCTAAFRWNRAIHGESMDFLVIVYSQTTNSAVHYERVTLTEQTYSRGYITTVILRV
GSWRPRRPGTEVKSYSEYTRELEDNAELDIVPRATATQSTEAMVLEARLVVVTFPELWLG
GHLIRQRTEVSLKPVLTATEESYQVFNDGSVVYPKLNDSKTVLYTDTNLSFTPIPLIPPL
SIKALHWPEAESYFRRRFSYFNLLQSVMFHKLFYTSENVIIGCPTGSGKTTCSELAILQH
IRDRYQAKSNEATMVYPKIVYIAPMKALIRERYNDWAESFSKDMNLSVMEITGESLPAAS
ALYRADIILATPEKFDAISRQWQWKKYIQMIGLMIFDELHLVGTTRGYVLESIICRMRYL
SELLALDRGVSDQPSQLRIIALSTVSANTGDLARWLNVKDISGIFNFNSAARPVKLETHI
QGFPGWHYSPRMTTMNRPIYTAIKKYSPRLPVLIFVASRRQTRRTAMALISFAEMDSSAP
PCLRSDGSNCEYLQSFVQDPDCKLTIGHGVGLHHAGMTHADRTAVEKLYLNRKISILVAT
STLAWGLNLPAFMTIIKGCEYFDGTVSRYVDYDTTDIIQMAGRAGRPQYTLDRLRDKFAT
GIFGEDAFDYLVSNKIIDQAYIMSSGGRFPNKEAVVDGLTRFTEQAPSIQNMGKDIVRDV
INGIELQLQSEPQSVCFIFCKTCMKEFYKQFFSEPFPFESSMISCTNTSPIVAAMMKKKA
TNIKHQTTHFPDIINAEVASFGSRTMFELRNWLQNSFLYIRARRNPLFYNIFPDPLVENL
QEMLEKADFEDTSYTPTRELQEMEAAFRLYLGISSVDDHRLVSRRDSKLFCRTGVYLIKL
ANRKTLRDFIITQEIYAWIETALLELSDNKFISLHKKPPKAQDTPTRLYFQDIDVKVKNI
LAVPTPLGEIVSRYYIRTRSGALINTWLTGETHTLQSYLDMLVRCEEFQEIPIRHNEDRD
SALLLQKYLWDGKREFSGALIRYNMPDDITCTEPSFKAHILLQAQLVRSSLQGAFELPVV
DYWLDLVTIIDAAIRITVATVEIALAKRLSRSIVQTVVQLSQGLVQGLWPNMEPMLSISS
LRNALQSNKKTFQKLSANGISTLQQLVDEFHKLGRKQLTEFLGKHQLLSGIQRKELCEEL
MKYPNLIIRATITRINRPANIPDKSKHTGKFVCVIISLKHVSSIQASPFPQQFSSEVYKK
SKPHTWFLVLSESETDTVIDYKRLSGFARERSQEFIIPFVSSLCISALSDCFLGMDKEIT
IDLSELSLNEPMVFELRSTQV
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcacactcttctgaagcttctctccccgtatgcacaaaggatgcaaatcacg
gacgaggagatgctcctagcagtcatgcagatccttgcctcacccagctccaatgaagag
atcaagaacagcctgcttgaattattgtcatacagtgtcttagatgaccctttattcaat
gacattcttagcaaccgagaggactatgtcgagatgtttacattgttatgcccaggtact
agcttaggacagcttagttctgacactcaagctgctctttcgacgcaggctgccaagcaa
gaaactctgcccaatcgcatatccattaatataaagtcaaagcaagcctctcaacaatca
gatgttcacccttatgtctccgaggagaatcttgaggacgctacccacctttcctccctt
ataaccattccgtctacaatcacacaaaccatttatataccccatgtccccgtgctctct
acttccactacttcgtctctgcgacctgtctctgatctgcccctagagtatcaaaaggtt
tttcccaagcgaataacgcacttcaatcgtattcagtctgaaagctatgaggttctcttc
aataacagttgcaatgtccttctttgtgcgcctactggtgcaggaaaaacggtgtgtgcc
ttgctctgcatgctccgtgctttctcatcggacttactcctcccgagcgacgataagccc
aagcctacgcagcacatcataacgttttctaatgcacccgtcatcccaaagcaggccacc
actacccctccctcttctgcaaagagtacccaactggttgtctatctaacacccatgaag
gccctggcgtctgagatgactacaacatttacagagcaactggagaagctgggattgact
gtactagagtgtactggtgatgaggcgccgccgcaagccaagttactagaggcgaatttg
ctgatctgtacgccggaaaagtgggacgtcttaaccaggaaaccggttggagaggttagc
ctgattcaacggcaaactctacttatcatcgatgagattcacttgctcggcgtttctgag
cgaggaccggttcttgaatccattatcatgcgcacacttcaatacagtgaaacgactcag
aaattcatgcgtattgtcggcatatccgcgaccattcctaactataaggatgtggcagag
tttctacatgtccccccagcaggccttctgtactatggtcaagagtataggccagttccg
ctggcacagacaataattggcataaagcctcagctcacagtcaaccaggagaaactcaat
cgtctgaccactcaaagcagttccgatcccagcgatcctctgcaactctcagacgtctat
tattacatgcaaaagtacgcacccgacgagcttaacaaccagccactttcaaagcaaatg
cgtgctttctgttctgtttccagaccacactgtttccctgtagtaaagggactagttgag
tctgagcatgagatactggagaagttccagagcaagatgactcatgtgctatcaaagagg
acagattcccaagcctcaacctcagggtctatgagcaacatgcgggggtacagctctcac
gacgtcatggacattgttactgtctctcttgttaaggagcagctattgcaaagacagaat
caggttcttgtgtttgtccacagtcgcatgggcacacagatccttgccagactgattggg
gatatgctccgcgcactgattcaacagggagccattcccacgcctgatatttcttctaat
atcctgaggagtatctccagtggcaagcaagatgatttgtcccaacttattggctgtgga
gttgcctatcacaacgcaggcatggaaaagagccaaaggcagactgttgagcaactcttc
agagatagtaagatccgcgttgtatgctgcactgctactctcgcttggggtgtcaatatg
ccatgttccaccgtcatcatacgaggcacagatattttctctgctggggtcgctggtcag
ataactaaggcaacagatatagacgtcctagatatccaacagatctttggacgtgctggg
cgcccccagtacacggcatctggagaggtaggccatggcattatattgaccgatatagaa
aagctggacacgtttgtgaggctgctaaataatgagtcaccgattgaatcccacatgcag
caggctcttccggacatcctcaatgcagaagtaatcctgggtaacgtctcgtctgtaact
gactgtgtttcgcttttacgacgcagcttcctagctactcgtgtggtcaacatgccatgg
ctctatggcgccaggatcacaaagtcagactcacgaggcaatggaaacttattcacatct
gtatccttagatcatactctaagggagtgcgtcatgaacgcaattctcaacttggctagc
aacaaagtcgtaacacttgataccgataacgagcatctatttccgactgaaataggaaga
atttgtagctattactacgtctccttcagaaacttttgcagatttatatcactcattaag
gattcagtcgtcggaagagtcactcacgacactctcctaggatgtctttgtgagtgctca
gacttttcaaagttcattatgcgcaagtcagagctggaggagctgtcactcttgagtggg
gacagcttcgaataccttggtttctattccaacgacacaaccagtgaccgccgcagcaac
aaggtgtctgcttcggaggcattttcacaaaaagatttacggaagtttcgtgattctctc
caaagccaatccaactcacaagccatctgcagactcaatattacgaatacagcggatatt
gacagtgcgccctacaaggttaacgttattcttcaaagctttatctcccagtggaggctt
cgtgttcagagtctagcaacagaccaacgcctttgtgtgacagtcgctcctcggattcta
cgtgcttttgctgaggcctcacttgtgcttcagagggtttcagaggcgcttaagctgtat
gatctggcgagcagcattgagtaccagcgctggttccagacgtctcttccattttggcca
attgttcgctcaccggttggatcaatggagcatatcaagaatcactaccttgtgacatta
gaagttagaaagcgccaaggagtgggtgaaattttgacggagaaacttatcatcgacttt
gaacatcacaagaacgcagaggactttccatctcccaactcatttttctctatgaccgtt
gatgatatctccacatatatatacgaccgcagccaggcgaagaagcttcatgagagcata
gccttcgtgcccaggctgattaccaaagcctctctttaccctgtatctaatcgcattctc
cgtctttcactatcatgcactgcggcttttcggtggaatagggccatccacggagagtct
atggatttcttagttatagtgtatagtcagactaccaattccgctgttcattatgagcgg
gtaacgcttacggagcagacctattctcgcggctatataacgactgtgattttgagggtt
ggcagttggaggccgcgacgacctggtacggaggtgaagtcctacagcgaatatacacga
gaactagaagataatgccgaacttgatatcgtgccaagagcgacagcgactcaatcaact
gaagccatggtgctcgaagcaaggcttgttgtcgtaacatttccggagctttggcttgga
ggccatttaatcaggcaaaggacagaggtttcattgaagcctgtgctcactgcaactgaa
gagtcttatcaagtcttcaacgatggcagcgttgtatatcccaagcttaacgactcgaaa
acagtattatatacagataccaatctatccttcaccccaataccactgattccacccttg
tctatcaaagctttgcattggcccgaggcggagtcatactttcgaagacgatttagctat
ttcaacctattacaatcggtaatgtttcacaaactgttttatacatcagaaaatgtcatt
atagggtgtcctaccggctctggaaaaacaacatgctctgagctagctattttgcagcac
attcgcgacagataccaggctaaatctaacgaagctacaatggtgtatccaaagatcgtc
tatattgcaccaatgaaggcactcatcagggaacgatataacgattgggcagaaagcttc
agtaaagacatgaacctctctgtcatggagatcacgggcgagtcgctaccagctgcctcg
gctctttaccgtgccgatattatactagcaactccagagaagtttgatgccatttcacgc
cagtggcagtggaaaaaatacatacaaatgattggcctcatgatcttcgacgagctacac
cttgtgggaacaacccgtggctacgtattagagtccataatctgcagaatgcgctacttg
tcggagctattagcgctggatcgtggagtaagtgaccagccatctcagctacggataata
gctctttcgacagtctctgctaataccggcgacctggcacgctggcttaacgtaaaggat
atcagcgggatctttaatttcaacagtgctgcacggcccgtgaaacttgagacgcacatt
caaggcttccccggttggcactactccccgcgaatgaccaccatgaacagaccgatctat
acagccattaagaagtatagtcccagacttcctgtattgatatttgtggcatctcgcaga
caaactagacgaactgcaatggcactgatttcctttgcagagatggattcctctgcgcct
ccgtgtctgcgctctgatgggtctaactgtgagtacttgcagagctttgtgcaagaccct
gactgtaagcttactataggccacggggttggtctccaccatgctgggatgacccacgca
gacaggaccgccgtagaaaagctgtacctgaaccgaaaaatatccattcttgtagcgacg
agtactctggcttggggactcaatcttcctgcctttatgaccataatcaagggctgtgag
tactttgacggcactgtcagtagatatgttgactatgatacgacagatattatccaaatg
gccggacgtgcaggacgcccccagtataccctcgaccgtcttagggacaagtttgcaacg
ggaatatttggagaggatgctttcgactatctcgtgagtaataaaataattgatcaggca
tacattatgagctctggagggcgatttccaaacaaggaagcggtggtcgatggactaacg
cgttttacagagcaggctccttctattcagaacatgggcaaggacattgtgcgagatgtt
attaacggaatagagctccaactccaaagtgagcctcaatcagtgtgcttcatcttctgc
aaaacttgtatgaaggagttctacaagcaattcttctccgagccctttcctttcgagagc
tccatgataagttgtacaaacacctcgcctattgtagctgctatgatgaagaaaaaggca
acaaacattaagcaccagacaacacactttcctgatataatcaatgcagaagtggcatcc
tttggatctagaaccatgtttgaactgcgaaattggctccaaaatagcttcctatacatt
cgcgccagacgcaatccactgttctacaatatatttccagatccgctagtagaaaactta
caggagatgctagagaaggccgacttcgaggacacaagctacactcccacgagagaacta
caagagatggaagccgccttccggctatatctaggcatatcttcagttgatgaccacaga
cttgtctcacgccgtgactctaaactattctgcagaacaggagtttatctcatcaagctg
gcaaatagaaaaactttgcgagacttcataataacgcaagaaatctatgcatggatagaa
actgctcttcttgaactgtcagataacaagttcatttcactacacaaaaagcctcccaag
gcccaggacacacccacacgtctatattttcaggatattgatgtcaaagtgaaaaacatc
ctggctgtcccgactccattaggagagattgtctctcgctattatatccgtaccagatca
ggagctcttattaatacctggcttacaggcgagacacacacgctgcaatcgtatcttgac
atgctggtgcggtgcgaggagttccaggaaatacccattagacataacgaagatcgggat
tcagctctgcttctccaaaaatatctctgggacggcaagcgagaattctctggtgctcta
atacggtacaacatgcctgacgacataacatgcacagagcccagctttaaagcacacatt
cttcttcaagcacaacttgtgcgctcatcgttgcagggagcatttgagcttccagtggtt
gattactggttggacttagtgaccatcattgatgcagcaatccgcataacggttgcaacc
gtagaaatagcgttagcaaagcgcctctcgcgcagcattgtacagacagtggtgcagctt
tcccagggacttgtgcaaggtctgtggcctaacatggagcctatgctctctatttcttca
ttgcgtaatgcactgcagagtaataagaaaacatttcaaaagttaagtgccaacggcatt
agtacactacaacaattagtggacgagttccacaagctgggcaggaaacagctaactgag
tttctaggaaaacatcagctactctcaggcatacagcgaaaagaattatgtgaggagctt
atgaaatatcctaatctaattattagagcgacgataacgcgtataaaccgaccagcaaat
attccagacaagtctaaacatactggaaagtttgtttgcgttattatatctctcaagcac
gtatccagcatacaagctagtccgtttccccagcagttttcctcagaagtctacaagaag
tctaagccacatacatggttccttgtgctatctgagtcggagacggatacagtgattgac
tacaaaaggctctctgggtttgcaagagaacgctcacaggagtttataattccgttcgtc
tcctctctttgcatcagcgcattgtccgattgcttcttgggaatggacaaagagatcaca
atagatctatcagagttgtcgctcaatgaaccaatggtttttgagttaagaagcacacag
gtctag
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integrated database retrieval system
