Giardia lamblia: GL50803_0089347
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Entry
GL50803_0089347 CDS
T01047
Name
(RefSeq) DNA-directed RNA polymerase II largest subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
gla
Giardia lamblia
Pathway
gla03020
RNA polymerase
gla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GL50803_0089347
09124 Replication and repair
03420 Nucleotide excision repair
GL50803_0089347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gla03021
]
GL50803_0089347
03400 DNA repair and recombination proteins [BR:
gla03400
]
GL50803_0089347
Enzymes [BR:
gla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GL50803_0089347
Transcription machinery [BR:
gla03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
GL50803_0089347
DNA repair and recombination proteins [BR:
gla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
GL50803_0089347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-GeneID:
5697088
NCBI-ProteinID:
XP_001704218
UniProt:
E2RTQ5
Q8MUU2
LinkDB
All DBs
Position
1:complement(222205..228435)
Genome browser
AA seq
2076 aa
AA seq
DB search
MDKEFALRIPYGVPKRVRFTLFSENEKNSLIPIVPRESSSDQMSMFSELNSTRLGVIFQE
ENECPTCSGKAGDQDPSVLCPGHLGVVKFGYDIFHPMIIDDLATLMNCFCPNCYHLKFFR
LFKETDRELAINALNRLRDTTPTLNFLPKLAELSATIACCERNILYRKKASGTSRNGVAP
QPLILAVSKSTRGSTARQAKDQDQLMDAHTCKLLITRYNKDDIVLLGLKRDHIENFIISS
IQVGSRAVRPSIRTDGTTAEDQLTEMYVSLFRNIRDCNNNSLNAGGGATGAKSQIGPNDI
YNAYKTLISAKGLNADGGSVPTKGIFERLSGKYGRMRSNLMGKRVNYCSRSVITGDPTIS
INELGVPRSVASRLTFPEVVTARNRDFLMKLVSNGNRYPGAVSKTLPSGTVQLIDTQVIN
STGWGSSTDADGRLGGETTNDPLPLGTIVNRHLLDGDYVLFNRQPTLHKSSFMGHRVKVL
PYSTYRLNLSATSSYNADFDGDEMNLHALQSLEAVAEISELCMVSNQVVSVKDNRPIVYI
VQDVLLGCYLFTGKDVTIPFARVCEYIMWMGFSRTSDPTYAHKLQRYDKGSVNQRGHSSA
SMSYDFSDHTSGSYNPAEYDSSSYLVGNSATGSVVDGRGSYLSTGNYGASSASRKAYEDN
INNDNGAYFKRPGSNVNTNDHVLLNVSQPAICYPEARWTGKQVFSMFVPRGVFYRSGDPK
DISAHADKYISFLDGSVMCGRIASSVVGGTESALIHILFRDYGIEPCRAFIDNCQRVVCR
FMLDHGFSVGMGDMVSSEHTERKVAEIQTKLSKDISELFKLSIHYKIKLAPGQSRNDAFE
QEVISKVSGTSLALEKVITDAAPHRNALLVMINAGSKGKKFNMMQISSSLGQQFLQSKRM
PHRFETHRSLPCYSPFSSLNMESRGYIFNSFIRGLNPAEFYFHAVGGREGVCDTAVKTAD
SGYVERKLLKVMESVCYRYDNSVRNDSNEIISFRYGDDGIDPHKSESREFKDFSISDMDF
LRAHYIDWSQIVDFQNTEMDESTDFYATLVREKFAVIIAKLRDTPEQFAHLCDGVSFYEV
CDDELRAKGFDNLVLDNNLVSFTELSSYLQNHYALFMDAESSPGYVPENIDDSWLDIGVK
SSLVLERDFAISTILVEYIVLLLERIWLQRSRITLDTDVKKFTFGMNLDRIIQSEIQAGS
INKVSRLIRESAWRCYLKPFEAIEKVNKLLSRIKSFRPKESTLFRVILRQCLSSKSCCYK
YRLTSEQLDRILATIEEKFVRGQVSPGEPVGPLAGHSVSEPATQLTLNTFHTAGTSALGG
LGLPRLKELIDFRNPKISVSTIYLNISNQDPANAGVDTRCTSHSPMLFNRPVAPRPNSYN
IASAEEATGRNIRQSKAWMNLAAKIEHTTFNYYIDDYKLIFDPFDELTCVADDREWLHLE
SEIGHLQQQVYGERPNEAVRFYSPFVLRYEIGLKQMQQKIEAGITIQTLVSRLILMLQQI
YTSRAGRPKSEDDDEDDEDDINIKQKAMIGREMPIINYYTGLGKTVIRVRPSLTEDEYNA
VKGSAIGSGAPDMEKSRLLAERYDGVDAFLRNVHISGNESIRKVFMASSNPLVHYGYDGF
TSNVDVFSQGSSDGLSMHKMSEGDLSKIGSIGKFTQPNSDISELYLQTDGSDLLWILTQP
EVDFTRTWTTNVREIYEILGIEAARALFIKQIRATLDKVDLNIHHYLILADIMSSRPQNN
KMISINRYGMQATNTGVLAQATFERPGATVLKAAAFGVVDPLKSVSSCVVMGKQGDFGTG
CFDLLLNCAELPSINEDELFPNSYYLKVHNATTEVRPTAGAEETPVDSMGMPFSTTFISP
TATAMVTPTSTYTSHSSVRSVVSAGGRVDANMNPLFSPGCNRSRQAENASRIFSSYTANT
LTSAKSSLPTQLTITSRSRGLSNIVDGRDSRIASITSAVNSKMSAFSMTSCNSINSFRSA
LASKASTHSNQYDTSDLVDVKGAGRYGIFTHSTNMSYENTAASIRNSGGMFASRSGSASS
VRSQSATNIDASAADSGQSGELRDNHEDDNNDYAEW
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagagtttgctttgcggattccttatggagtcccaaagcgtgttcgctttact
cttttcagcgagaacgaaaagaattcccttattcccattgtgccaagggagtcttcaagt
gatcaaatgagcatgttctcggagctgaacagcactcgcttaggcgtcatcttccaggaa
gaaaacgagtgccccacatgcagtggtaaggctggtgaccaggatccctcagttctctgt
cctggtcacctcggtgtagttaaatttggttacgacatctttcaccccatgataatagat
gacctagctactttgatgaattgcttttgccccaattgctatcacctaaagttttttaga
ctcttcaaggaaacagaccgtgagcttgccataaacgctttaaacagactcagagatact
acgccaaccctgaactttctcccaaaattagcggaactatcagctacgattgcttgctgt
gagaggaatatactttacaggaagaaggcttccgggacgtccaggaacggcgtggcgcca
caaccactaatcctagctgtctctaagagtacaagaggaagcactgcaaggcaagccaag
gatcaagatcagctaatggatgctcacacatgtaagctccttattacgcgctacaacaaa
gatgacatcgtcctgttgggtctgaagagagaccatatagagaacttcatcatttcctcc
atacaggtagggtcccgtgcagttcgtccctcaattaggacagatgggacaacagcagaa
gatcaattgaccgaaatgtatgtctccttgtttcgcaatataagagattgcaacaataat
agtctaaacgctggcggtggcgccacgggtgctaagtctcaaattgggcccaacgatatt
tataacgcatacaagactctcatctctgccaaaggactcaacgcagatggaggttctgtg
cccaccaagggaattttcgagcgtctttctggaaagtatggtagaatgagaagcaactta
atgggaaagcgcgttaactattgttcacggagcgttattactggtgatccgactatcagc
atcaacgagttaggggtgcctcgttctgttgcaagtaggcttacgttcccagaggttgtt
actgcacgcaaccgtgactttcttatgaagcttgtttccaacggcaaccgctaccctgga
gccgtcagcaagacacttcccagtggcaccgtccagcttatagacactcaggtaataaac
tcaactggctggggctcttccactgacgcagacgggcgactgggtggagaaaccaccaac
gatcctcttccactaggaaccatagttaacaggcatctgcttgatggtgattatgtcttg
tttaacaggcagccaacccttcacaagtcatcctttatgggccaccgtgtgaaggtcctt
ccttacagcacgtatcgattaaatctttcggcgacatcctcctacaatgcagactttgat
ggagacgaaatgaacctacatgccttgcagagtctagaggctgtcgcagagattagtgag
ctttgcatggtgagcaaccaggttgtttccgtcaaggataacaggcccatcgtctacatc
gttcaggatgttctcttgggctgttacttgttcacagggaaggatgtaactattcccttt
gcacgggtatgtgagtacatcatgtggatgggatttagcagaacctccgaccctacgtat
gcacacaaactgcaaagatacgacaaggggtcggtgaaccagcgaggacactcttcagca
tctatgtcttacgactttagtgaccacacctctggctcttacaatcctgctgagtatgat
tcttcatcgtacttggtgggtaactctgctactggtagtgtagttgatggacgaggatcg
tatctttctactggcaattatggcgcctctagcgcatctcgaaaggcatatgaggacaat
atcaataacgataacggcgcatactttaaacgccctggaagcaacgtgaatactaatgac
catgttctccttaatgtttcccagcccgccatttgctatccagaagcacggtggactggt
aaacaagtgttctctatgtttgtacctagaggtgtgttttaccgctctggagatcccaaa
gacatatccgcacatgcagacaaatacatttcttttctggatggcagtgttatgtgtggt
cgcatagcatcatctgtcgtaggaggaactgaaagtgcactaatccacatcctctttagg
gattatggcattgagccatgcagagcgttcatcgataattgtcagcgtgttgtgtgtcgg
tttatgctggaccatgggttctctgttggaatgggagatatggtgtcgtcagaacacact
gagaggaaagtcgctgagattcagaccaagctttcaaaagacatcagtgagctgtttaaa
ctatctattcattacaaaattaagctggccccaggacagtcccgaaatgatgcatttgag
caagaggtcatttcaaaggtgtctggcacttctcttgccttggagaaggtaattaccgat
gcggctcctcatagaaatgcgcttctggttatgataaacgctgggtcgaaggggaagaaa
ttcaatatgatgcaaatctcatcgtcattgggccaacagtttctccaaagcaagcgcatg
ccgcataggttcgagacccacaggtctctcccctgctacagtcctttcagcagtttaaac
atggagagccggggctacattttcaactcattcatcagggggctaaatccagcagagttt
tatttccatgctgtgggtggacgtgaaggagtgtgtgacactgcggtcaaaacagctgat
agcggatatgttgaaagaaagctcctaaaggtaatggagtctgtttgttatcgttatgac
aactctgtccgcaatgactccaacgagattatttcattccgatatggagacgacgggata
gatccgcacaaatcagaaagccgcgaattcaaggacttctccataagtgacatggacttc
ttgcgtgctcactatattgattggtcgcagatagtcgattttcagaacactgagatggat
gagagcaccgatttctacgctactttagttcgggaaaaattcgcggttatcattgccaag
ctccgtgatactcccgagcaattcgctcatctctgcgatggagtttcattctacgaggta
tgtgacgacgaattaagagctaaagggttcgacaatctagtcctggataataacctggtt
tcctttactgaattatcgtcatatctacagaaccattatgcgctatttatggatgcagaa
agctcacctgggtatgttcctgaaaacatagacgactcttggctggatattggggtaaaa
tcatcacttgtgctagaacgagactttgcgattagcactatacttgtcgaatacattgtc
ctcttgttggagaggatctggctccagcgctctagaattaccctagacacagatgtcaag
aaattcacctttgggatgaatctggacagaataattcaatcagagatccaagcaggctct
atcaacaaggttagtagattgatccgagagtctgcgtggagatgctatctcaagcccttt
gaggctatagaaaaggtgaacaagctcctctctaggataaagtcctttcggccgaaagaa
tctactctattccgagtcattctgcggcaatgcttgtcttcaaagtcatgctgttataaa
taccgtcttaccagtgagcaactggatagaattcttgcaaccattgaggaaaagtttgtt
agaggccaagtttctccaggagaacctgttgggccactggctggacactctgtctccgag
cccgctacacaacttactctcaacacgttccatacagcaggaacctccgcactcggaggc
cttgggcttcctcgcctcaaggagctcatcgacttccgaaatccaaagatttccgtcagc
accatatatcttaacatttctaaccaggaccctgccaatgctggtgtggatactcggtgt
actagccattctccgatgcttttcaaccgtcctgtggctcctcgtcccaacagctacaat
atcgcatcagccgaggaggctaccgggagaaacatccgacaatctaaggcgtggatgaac
ttggctgcgaaaatagaacatacaacattcaactattatatagatgactacaaacttatt
tttgatccatttgatgagctcacctgtgttgcggacgacagggaatggctccacctagaa
tcggaaatagggcatttacaacagcaagtctatggagagcgtccaaacgaagctgttcgc
ttctactctccgtttgttctccgatatgaaataggactgaaacagatgcagcagaagatc
gaagctgggattaccattcagacacttgtgagtaggttgatactgatgctgcaacaaata
tacacatcaagagcgggtcgcccaaagtctgaagacgacgatgaggacgatgaagatgac
attaacattaagcaaaaagccatgattggccgtgaaatgccaataataaattactatacc
ggcttgggcaaaactgttatacgagttagacccagcctcactgaggatgagtataacgcc
gtcaaggggagcgccattggtagtggggcgccagacatggaaaagagcagattgctagcg
gagcgatatgatggcgttgatgcatttctcaggaatgttcacatatcgggcaatgagtca
atcagaaaggttttcatggcgtcgtccaatccgctggttcattatggttatgatggcttc
acatctaacgtagacgtcttctctcagggctccagtgacgggctctctatgcacaaaatg
tcagaaggagatctaagcaagataggttcgatagggaaatttactcaacccaacagcgat
attagcgagctctatttacagacagacggttctgatctcctttggattttgacgcagcca
gaggtggactttaccaggacgtggactacaaacgtgcgagagatctatgaaatcttggga
atagaagcagcacgagccttatttataaaacagatcagagcgacccttgacaaggtagac
ctcaatattcaccactacttaattttggccgatattatgtcctcgcggccccaaaataac
aagatgatatctataaatcgatatggtatgcaagcaaccaatactggtgtgctggcacaa
gctaccttcgagcgccccggggcaaccgtcctcaaggcagctgcgtttggtgttgtggat
cctctcaagtctgtctcttcttgtgttgttatggggaagcaaggtgactttggaactggt
tgttttgatcttctgctcaattgtgcagaacttccaagtattaacgaggatgaacttttc
ccgaactcctattatcttaaggtccataatgcgactacagaagtcaggcccacagccgga
gcagaagaaacaccagtcgatagcatgggaatgccgttttcaacaacctttatctctcca
actgccactgcaatggtgacaccaacttccacgtacacttcacactcatctgtaaggagt
gtcgtgtctgcaggtggacgtgtggatgctaatatgaatccactattcagccctgggtgc
aaccgctcaagacaagccgaaaacgcttcacgtattttctcaagctacacggccaatacc
ttgacttcagcaaagtccagtcttcccacacagctaaccatcactagtaggtcccgagga
ctgagtaacatcgttgacggcagggactctagaatagcatccattacaagtgcagttaat
agcaagatgagtgcattctctatgacttcttgtaacagcatcaacagcttccgttcagca
ctggcatctaaggcaagcacgcatagcaatcaatatgatacgtccgatcttgttgatgtg
aaaggagcaggtagatatggaatctttacccactccactaatatgagctatgagaacaca
gctgcttctattcgaaatagtggaggaatgtttgccagtagatccggaagcgcatcctct
gtgcgctcgcaaagcgcaacaaacattgatgccagtgctgcagactcaggtcaaagtgga
gagcttcgagacaatcatgaggacgataacaacgattatgctgagtggtga
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integrated database retrieval system
