Glaciimonas sp. PAMC28666: JQN73_00425
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Entry
JQN73_00425 CDS
T07066
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
glc
Glaciimonas sp. PAMC28666
Brite
KEGG Orthology (KO) [BR:
glc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
glc03009
]
JQN73_00425 (rimO)
Enzymes [BR:
glc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JQN73_00425 (rimO)
Ribosome biogenesis [BR:
glc03009
]
Prokaryotic type
ribosomal protein modification factors
JQN73_00425 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QRX82819
LinkDB
All DBs
Position
complement(114545..115918)
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AA seq
457 aa
AA seq
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MSNVIPVAAPVAPKVGFVSLGCPKALVDSEQILTQLRAEGYETAKSYDGADLVIVNTCGF
IDAAVQESLDAIGEALSENGKVIVTGCLGVKKDAAGDDIIKKIHPKVLEVTGPHALTEVM
FAVHKHLPKPHAPFFDLVPPQGVKLTPKHFAYLKISEGCNHRCSFCIIPSMRGDLVSRPI
ADIMLEAENLFKAGVKELLVISQDTSAYGVDVKFRMGFWNGKPVKTHMTQLVTALGELGA
QYGAWVRLHYVYPYPHVDHIIPLMAEGKILPYLDVPLQHAHPDVLKRMKRPANGEKNIER
IQAWRALCPDITIRSTFIAGFPGETEAEFEYLLDFLKEVEIDRLGCFAYSPVEGATANQI
ANPVPEELREERRGRVMLLQEEISKKRLQAKVGKTMRVLIDSIDRNGGVGRSSADAPEID
GVVYVKPPFEPHKKLVVGEFVDVTITASDSHDLWAAA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgttatccccgtagccgcaccggttgcccctaaagttggtttcgtatccctt
ggttgccctaaggcgctggtcgattccgagcaaatcctgacgcaattgcgtgctgaaggt
tacgaaactgccaagtcttatgacggcgctgatctggtgatcgtgaatacctgcggattc
atcgacgctgcggttcaagagtcgctcgatgccatcggcgaagcgctcagtgaaaacggc
aaagtaattgtaaccggttgtctcggtgtaaagaaagatgccgctggcgatgacatcatc
aaaaaaattcatcctaaagtgttggaagttaccgggccgcacgcattgacggaagtcatg
tttgccgtgcataagcatctccccaagccgcacgcgccttttttcgatctggtgccgccg
caaggggtcaagctgacaccgaaacattttgcctacttaaaaatttccgaaggctgtaac
catcgttgcagcttctgcatcattccatcgatgcgcggcgatcttgtgtcgcgcccaatt
gctgacatcatgttggaagccgagaacctcttcaaagcgggcgtgaaagagttattggtt
atttcccaggacaccagcgcctacggcgtggatgtcaagtttcgcatgggattctggaac
ggtaagccggtcaagacccacatgacccagctggtcaccgcgctgggtgagttgggcgcg
caatacggtgcttgggttcgcctgcactatgtttatccgtatccgcacgtcgaccacatc
attcctttgatggctgagggaaaaattctgccttatctggacgtgccgctgcagcatgcg
catcctgatgtattgaagcggatgaagcgtcctgccaatggtgagaaaaatattgaacga
attcaggcctggcgtgcactgtgcccggatatcactattcgctcgacgttcatcgctgga
ttcccgggtgagactgaagctgaattcgaatatttgctagacttcctgaaagaagttgaa
attgatcgtctgggctgttttgcgtattcgccggtggaaggtgcaactgcgaaccagatc
gctaatccggtcccggaagagctgcgagaagaacgccgtggccgcgtgatgttgttgcag
gaagaaatttccaaaaagcgtctgcaagccaaggttggtaaaaccatgcgcgtgttaatc
gactctatcgaccgtaacggcggtgttggtcgttccagtgcagatgcgccggaaatcgat
ggcgtagtctatgtaaaaccaccgttcgagccacataaaaaattggtggtcggcgagttt
gtcgacgtcacgatcaccgcttcagattcgcatgacctgtgggcagctgcatga
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