Glaciimonas sp. PAMC28666: JQN73_11970
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Entry
JQN73_11970 CDS
T07066
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
glc
Glaciimonas sp. PAMC28666
Pathway
glc03030
DNA replication
glc03410
Base excision repair
glc03420
Nucleotide excision repair
glc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
glc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JQN73_11970 (polA)
03410 Base excision repair
JQN73_11970 (polA)
03420 Nucleotide excision repair
JQN73_11970 (polA)
03440 Homologous recombination
JQN73_11970 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
glc03032
]
JQN73_11970 (polA)
03400 DNA repair and recombination proteins [BR:
glc03400
]
JQN73_11970 (polA)
Enzymes [BR:
glc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JQN73_11970 (polA)
DNA replication proteins [BR:
glc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JQN73_11970 (polA)
DNA repair and recombination proteins [BR:
glc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JQN73_11970 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JQN73_11970 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QRX80934
LinkDB
All DBs
Position
2779643..2782459
Genome browser
AA seq
938 aa
AA seq
DB search
MQKTLLLVDGSSYLYRAFHALPDMRNADNEPTGALYGILNMLRRLRLDYPAAYIACVFDA
KGKTFRDDMYTEYKATRASMPEDLVKQITPIHAAVRAMGWPILMVEGVEADDVIGTLTVQ
AVAHGMTAVVSTGDKDLAQLVNQHVTLINTMNNEKLDPPGVVAKFGVPPERIVDYLTLIG
DTVDNIPGVSKVGPKTAVKWLAQYDTVDQVIANAANIGGAVGENLRKAIDWLPQAKALVT
VKTDCDLSAHMGAFPDSLAILPQDSQTLIALYTRYNFKTWLRELSSSVAAAPSLTENTGA
SADVEKAGSIGSVIESVVGSVVAAVESLAQSSLFPQAVTNYEAVTTELQLDRWIAAITDA
RLTSVDTETTSLDPMTAQLVGISLSCALGEAAYIPVAHRTQDATEQLSLAFVLGKLKSWL
EDPSKLKVGQNLKYDSHIFANQGVTLRGIAHDTMLESYVFESHRPHDMDSMALRHLGHKT
ITFQDVCGKGASQICFDEVEIARATEYAAEDADVTLRLHQTMWPHIEGDEKLRFIYESIE
VPTAVVLQKIERNGVLIDADLLKIQSNEIGKRLLEIEQQAYVLAGQPFNLNSPKQLGEIF
FEKLQLPIIKKTPSGAPSTDEEVLQKLAEDYPLPKILLDYRSLSKLKSTYTDKLPKMVNQ
LTGRVHTNYAQAVAVTGRLASNDPNLQNIPIRTAEGRRIREAFVAPKNSVIVSADYSQIE
LRIMAHISGDENMLRAFSEGIDIHRATGAEIFGVLAADVSSEQRRYAKVINFGLIYGMSA
FGLAGNLGIERAAAQMYIEKYFMRFSGVKLFMDNTRLQAKAQGYVETVFGRRLWLPEINS
PNGPRRQGAERAAINAPMQGTAADLIKLSMIAVQGWLEAEQLASKMVMQVHDELVLEVPQ
HELELVRVKLPELMASVATLRVPLIAEVGIGKNWDEAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaccctgctgttagttgatggttccagttacctttaccgggcatttcacgcg
ctgcccgacatgcgcaatgccgacaacgagccaaccggcgcgttgtacggcattttaaat
atgcttcgccgtttgcgacttgattaccctgcagcttacattgcctgcgtgttcgatgca
aaagggaaaacgtttcgtgacgatatgtataccgagtacaaggctacacgtgcttcgatg
ccggaggacctggttaaacagattacgcctattcacgctgcagtgcgcgcaatgggttgg
cctattttgatggttgaaggggtcgaggcggatgatgtcatcggcactttgacggtacag
gcggtcgcgcacgggatgaccgctgtggtgtcaaccggtgataaggatctggcgcaactg
gttaatcagcacgtgacgctgattaatacgatgaacaacgaaaagttggacccgccgggt
gtggtggctaaatttggcgtgccgcccgagcgtattgtcgattatttgaccctgataggt
gacacggttgataatattccgggtgtgtcgaaggtcggcccgaagactgcggtgaaatgg
ctggcgcaatacgacacggtggatcaggtgattgcgaatgccgccaacattggcggcgcg
gtaggtgaaaatctgcgcaaggcgatcgattggctgccgcaagccaaggcgctcgtaaca
gtcaagaccgattgcgatctgagcgcccatatgggtgcctttccagattcgctggcgatt
ttgccgcaagatagtcagacattgatcgcactttacacgcgctacaatttcaagacctgg
ctacgggagctgagtagtagcgtcgctgctgcaccttctttgaccgaaaatacaggcgcg
tcggctgacgttgaaaaggccggctcgatcggatctgtgattgaatctgtggttggatcg
gtagttgcggccgtcgaaagtctggcgcagagcagcctgttcccacaggcagtaaccaat
tacgaggcagtgacaacggagctgcagcttgatcgttggatagccgccattaccgatgca
cggttaacttctgtcgatactgaaaccacctcactcgatccaatgactgcacaattggtc
ggcatttcgctcagttgcgcgttaggcgaggcggcgtatatccccgtagcacatcggacg
caggacgctacggaacagctgtcactagcgtttgtgctgggcaaattgaaatcctggctg
gaagaccccagcaagttaaaagtgggccagaatctaaaatatgatagccatatttttgcc
aatcaaggggtgacgttgcgtggaatagcgcatgacacgatgttggaatcgtatgtcttc
gaatctcatcgcccgcatgatatggatagcatggcgttacgtcatctgggacataaaacc
atcacgtttcaagatgtgtgtggaaaaggcgcatcacagatttgtttcgatgaggtagag
atcgcgcgcgccacagaatatgccgcggaagacgcagacgtgactttgcgcttgcatcag
accatgtggccgcacattgagggtgatgaaaagctgcgttttatttacgaaagcatcgag
gtgccgacggcggttgttttacaaaaaatagaacgcaatggcgtcctgatcgatgctgat
ttgttgaagattcaatcgaacgaaataggtaagcgcctgctggaaattgaacagcaagct
tacgtattggcgggccagccattcaatctcaattcaccgaagcaattgggcgaaattttc
tttgaaaagctgcaattgccgatcatcaaaaagacgccctccggtgcaccatcaaccgat
gaagaagtgttgcagaaactggcagaagactatccgttgccaaagattttgctcgattat
cgtagtctttcaaaattgaaatcgacctataccgataagctgccgaagatggtcaaccag
ttgaccgggcgggtgcataccaattatgcgcaagcggtggcggtcacgggaagattggcc
tcgaacgacccaaatttgcaaaatattccgattcgtaccgcagaaggtcggcgtattcga
gaagcatttgttgcgccgaaaaatagcgtgatcgtctctgctgattattcgcaaatcgaa
cttcgcatcatggcgcatatatccggcgacgaaaatatgctgcgggcattttcggaaggt
atcgacattcaccgtgcgactggcgcagagattttcggcgtcttggccgcagatgtcagc
agtgagcaacgccgctatgccaaggtgattaacttcggtttaatttacggcatgagcgcg
tttggcctggcagggaatctgggtatcgaacgcgccgcggcgcagatgtatatcgaaaaa
tattttatgcgcttttccggtgtaaaactatttatggataacacccgactgcaggccaaa
gcccaaggttatgttgaaaccgtttttggtcgtcgcttatggctgccggaaattaactcg
ccaaacggcccgcgccgtcagggcgctgaacgtgcagcgattaatgcaccgatgcaaggc
accgctgccgatttaattaaattgtcgatgattgccgtacagggttggcttgaggccgag
cagttagcttccaaaatggtaatgcaggttcacgatgagctggtgctggaagtgccgcag
cacgagttggaattagtccgggtaaagttgccggaactgatggcaagtgtagcgacattg
cgggtgccgctgattgccgaagtgggtatcggtaaaaattgggacgaagcgcattaa
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