Glaciimonas sp. PAMC28666: JQN73_12350
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Entry
JQN73_12350 CDS
T07066
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
glc
Glaciimonas sp. PAMC28666
Pathway
glc00521
Streptomycin biosynthesis
glc00523
Polyketide sugar unit biosynthesis
glc00525
Acarbose and validamycin biosynthesis
glc00541
Biosynthesis of various nucleotide sugars
glc01100
Metabolic pathways
glc01110
Biosynthesis of secondary metabolites
glc01250
Biosynthesis of nucleotide sugars
Module
glc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
glc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JQN73_12350 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JQN73_12350 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JQN73_12350 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JQN73_12350 (rfbB)
00525 Acarbose and validamycin biosynthesis
JQN73_12350 (rfbB)
Enzymes [BR:
glc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JQN73_12350 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QRX81003
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All DBs
Position
2873070..2874149
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AA seq
359 aa
AA seq
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MILITGGAGFIGSNFVLDWLAQSDEPVINLDKLTYAGNINNLASVKEDQRHIFVHGDIGD
TAHVAALLDQYKPRAVVHFAAESHVDRSIHGPAAFIETNVNGTFGLLEAVRAHWSALAVT
DKEAFRFLHVSTDEVYGTLGAHDAPFTETTPYAPNSPYSASKAASDHLVRAYHHTYGLPT
LTTNCSNNYGPYHFPEKLIPLIITNARAGKPLPIYGDGQQVRDWLYVSDHCAAIRRVLES
GQPGEVYNIGGWNEKANLDVVHVLCDILDNLDPKSSGSYRDQITYVTDRPGHDRRYAIDA
GKIAQELSWKPAETFETGIRKTVQWYLDNQPWVNNVQSGDYLKWVEQNYSQRSGSKENT
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgattctaattactggcggtgccggttttattggctccaattttgtactcgactggctg
gcacaaagcgacgaaccggtaatcaatctcgataagctgacctacgcgggtaacatcaat
aatctcgccagtgtcaaagaagaccaacgacatattttcgttcatggtgacatcggtgat
actgcacacgttgccgcgttgctggaccagtataaaccgcgtgcggttgttcacttcgca
gcagaaagccatgttgaccgctcaattcatggtccggctgcatttatcgaaactaacgtg
aacggcacattcggcttgctcgaagctgtgcgcgcgcattggtcagctctggccgtgact
gataaagaagcttttcgttttctccacgtttcaaccgacgaggtgtacggcacactgggc
gcacacgatgctccgttcacagaaaccacgccgtacgccccaaatagtccatattcggcc
tctaaagctgcatcagaccatctggtccgtgcgtatcaccatacctacggtttaccgacc
ctaacgactaattgttcgaacaattacggcccgtatcattttcctgaaaaactcataccg
ctgattatcaccaacgctcgtgccgggaagccgttacccatctacggcgatggacaacag
gtacgcgactggctttacgtcagcgatcattgcgctgcaattcgccgcgtcctggaatcg
ggccagccgggggaggtttataatattgggggctggaatgagaaagccaatctggatgta
gtccacgttttgtgtgacattctagacaatctcgatccaaagagcagcggtagctaccgc
gatcaaatcacttacgtcacggatcgcccgggacacgatcgtcggtatgccattgatgcg
ggcaaaattgctcaggagttaagttggaaaccagccgagactttcgaaacaggcatccgc
aaaaccgtccagtggtatctcgataatcagccgtgggtgaataatgttcaatcgggcgat
tatctgaaatgggtggaacagaactacagccagcgtagcggcagcaaggagaatacttaa
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