Glaciimonas sp. PAMC28666: JQN73_17155
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Entry
JQN73_17155 CDS
T07066
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
glc
Glaciimonas sp. PAMC28666
Pathway
glc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JQN73_17155 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glc03019
]
JQN73_17155 (pnp)
03016 Transfer RNA biogenesis [BR:
glc03016
]
JQN73_17155 (pnp)
Enzymes [BR:
glc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JQN73_17155 (pnp)
Messenger RNA biogenesis [BR:
glc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JQN73_17155 (pnp)
Transfer RNA biogenesis [BR:
glc03016
]
Prokaryotic type
tRNA degradation factors
JQN73_17155 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
S1_RRP5
KH_KhpA-B
KH_NusA_2nd
DUF5813
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QRX81850
LinkDB
All DBs
Position
4042995..4045142
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AA seq
715 aa
AA seq
DB search
MFNKVTKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVILATVVARKDAKPGQDFFPLT
VDYVEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYMNEVQVIIHVLSV
NPEIDPDIAAMIGASAALSVSGVPFSGPVGAARVGYIDGQYVLNPTTTQLKTSLLDLVVA
GTEAAVLMVESEAKQLSEEVMLGAVVYGHEQMKAVIDAIHDLVRDGGKPEIQWSPAPKNE
ALIASVTDLAEADLRLAYQTKDKQARTAQLKDAVSKVHVALAGIAAANNSPAPDSSEVGN
IIFDLEAKIVRSQILDGEPRIDGRDTRTVRPITIRTGVLPRTHGSALFTRGETQALVIAT
LGTARDEQKIDALMGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALLAAL
PAPEDFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMQGHVAGIAMGLIKDGGKF
AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALAQAKVGRIHILG
EMEKAVPSGSQSELSDFAPRLITVKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGV
VTIASVDAAAGQEAKRRIEELTASVEVGKIYEGTVLKLLDFGAIVQVLPGKDGLLHISQI
ANERVNAVADYLKEGQQVKVKVLETDDRGRLKLSMKAAQEAGDVASAPTHADPAV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaataaagttactaagactttccagtacggccagcatcaagtgacgttggaaacc
ggcgaaatcgctcgtcaggcttctggcgcagtattggtatccattgaagataccgttatt
ctggctaccgtggttgcacgtaaagatgccaaaccgggtcaagattttttcccgttgact
gttgattatgttgagaaaacctacgctgccggtcgtattccaggtggtttcttcaagcgt
gaaggtcgtccttcagagaaagaaacactgacatcgcgtctgatcgatcgtccgatccgt
ccgttgttcccagaaggttacatgaacgaagtgcaagtgatcattcacgtgctgtcggtc
aatcctgaaatcgatcctgacatcgctgcgatgatcggtgcatcggctgcattgtccgtt
tctggcgtgccattctcaggcccggtcggagctgcacgcgtcggttacatcgacggtcag
tacgttctgaacccaaccacgacacaattgaagacatcgttgctggatctggttgttgcc
ggtactgaagcagcagtgttgatggttgaatcagaagccaaacaattgtctgaagaagtc
atgttgggtgcggttgtttacggccatgagcaaatgaaagcggttattgacgcgattcat
gatctggtacgcgatggtggcaaaccagaaattcaatggagcccggcaccgaagaatgaa
gcgctgatcgctagcgtgacagatttggcagaagccgatcttcgtttggcctatcaaact
aaagataagcaagcgcgtaccgctcagcttaaagatgctgtgagcaaagtgcatgttgca
ttagccggcatcgcagctgcgaacaattctccagcaccggacagctccgaagtcggcaac
atcatatttgatctggaagctaaaatcgttcgttcgcaaattctggatggcgaaccacgt
attgacggtcgcgatacacgcactgtgcgtccaatcacgatccgaaccggtgtattgcca
cgtacgcatggttccgctttgttcactcgtggcgaaacgcaagcattggttatcgcaacg
ttgggtactgcacgcgacgagcaaaaaattgatgcgttgatgggcgagtactcagatcgc
ttcatgctgcattacaacatgcctccgttcgctactggcgaaacaggtcgggtaggcacc
ccgaagcgtcgtgaaattggtcatggccgtttggctaagcgcgcattgttggcagcactg
ccagcaccggaagatttcagctactccgtacgtctggtgtcagaaattactgagtctaat
ggttcatcgtcgatggcttcggtctgtggcggatgtctggcattgatggacgctggcgtg
ccgatgcaaggccacgttgctggtatcgctatgggtttgatcaaagacggcggcaaattc
gcagtgttgacagacattttgggcgatgaagatcacctcggcgacatggatttcaaagtt
gctggtactgcaaacggtatcaccgcgttgcaaatggatatcaaaatccagggtatcacc
aaggaaatcatgcaagtcgctttggcgcaagctaaagtcggccgtatccatattttgggt
gagatggaaaaagcagtgccaagcggttcccaatcggaactgtctgactttgcaccgcgt
ctgattacggtcaagatcaatccggaaaaaatccgtgacgtgatcggtaaaggcggcgcg
gtaattcgtgcgttgacagaagaaacaggtactcagatcgatatcagcgatgaaggcgtt
gttaccatcgcttcagttgatgctgccgccggtcaagaagccaaacgccgtatcgaagaa
ctgacagcttcagttgaagttggcaagatctacgaaggcacagtattgaagttactggac
ttcggcgcgatcgttcaagtgttgccgggcaaagacggcttgttgcacatcagccagatt
gccaacgagcgcgtcaatgcggtcgctgactatctgaaagaaggccagcaagtcaaagtt
aaagtcctggaaactgatgaccgtggtcgtttgaaattgtcgatgaaggcggctcaggaa
gctggcgatgttgcttcggcaccaacgcatgctgatcctgctgtataa
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