Glaciimonas sp. PAMC28666: JQN73_20055
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Entry
JQN73_20055 CDS
T07066
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
glc
Glaciimonas sp. PAMC28666
Brite
KEGG Orthology (KO) [BR:
glc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
glc03009
]
JQN73_20055 (dbpA)
Enzymes [BR:
glc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JQN73_20055 (dbpA)
Ribosome biogenesis [BR:
glc03009
]
Prokaryotic type
rRNA helicases
JQN73_20055 (dbpA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
ERCC3_RAD25_C
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QRX82353
LinkDB
All DBs
Position
complement(4664069..4665457)
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AA seq
462 aa
AA seq
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MTTSSFSNLPLSPALLRNLDSLGYHEMTTIQAQSLPVILERRDLIAQAKTGSGKTAAFGI
GILHKLNPTYFAIQALVLCPTRELADQVAKELRRLARLEDNVKILTLCGGSPMGPQIGSL
EHGAHIIVGTPGRIRDHIGRGSINLSTVQTLVLDEADRMVDMGFYEEISGIVSACPKRRQ
TLLFSATYPDDIRKASAEFLRQPVEVKVEAQHDSGQIEQRFYEVSYDGRNGAVAQLLNHY
RPVSTIAFCNTKIHCRELAAELRDQGFSALALYGELEQRERDEILVQFANQSCSVLVATD
VAARGLDIQTLGAVINVDVSKDTEVHIHRIGRTGRGHDKGLALSLCAPNEKKWVKLIEDY
QNGPVSWFDLAALEPAEGGPLQAPMVTLCIMGGKKDKLRPGDLLGALTGDVGLTKEQVGK
ISVFEFMTYVALERRMAKHAFSRLSNGNIKGRNFKMRFISEL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgactacctcctccttttcaaatcttcccctttcaccggcacttttgcgcaaccttgat
agtctcggttaccacgagatgacgactattcaagcgcaaagtctgcctgtcattctggag
cgacgcgatttgatcgcgcaggctaaaaccggtagcggtaaaacagccgcttttggtatc
ggcattttgcataaactgaaccccacttactttgcgattcaggcactggtattgtgtccg
acccgagagctggccgatcaggtggcaaaagaactgcgaagattggcgcgcctggaagat
aacgtcaaaatattgacgctgtgcggcggttcgccaatggggccgcagatcggttcgtta
gaacatggcgcgcacattatcgtcggcactcccggtcgcatacgtgaccatatcgggcgt
ggcagcattaacttatcgacggtacaaacgctggtgctggacgaagctgatcgcatggtt
gacatgggattttatgaagagatttcggggattgtgagcgcctgtccaaagcgccgtcag
acattgctgttttccgcgacttatcctgatgatattcgaaaagcgagcgctgaattttta
cgtcagccggtggaagtaaaagttgaagcacaacatgattcgggccagattgagcagcgc
ttctacgaggtttcttacgatggacgtaacggcgcggttgcgcaactgcttaatcattat
cggccggtgtcgaccattgctttctgtaacaccaaaattcactgccgcgagttagctgcg
gaactgcgcgaccagggttttagtgccctggcgttgtacggcgaacttgagcaacgtgag
cgcgatgaaattttggtccagttcgctaatcagagttgttcggtgttagttgcaaccgat
gtcgccgcgcgtggtttggatattcagacgttaggcgcagtgattaacgtggatgtgtcg
aaagataccgaagtgcatattcatcgcatcggtcgtactggacgcggtcatgacaaaggc
ctggcattgagtctttgtgcaccgaatgaaaaaaaatgggtcaagctcattgaagattat
cagaatggacctgtgtcctggtttgatctggccgcattggagccagccgaaggcggaccg
ttgcaagcgccaatggtgacgttatgcatcatgggcggcaaaaaagacaaactacgccca
ggtgatctattaggtgcactgaccggcgacgtcggccttaccaaagaacaggtggggaaa
atcagcgtatttgaattcatgacgtatgtcgcactggaacggcgcatggcaaagcacgcg
ttttctcgcttaagtaacggcaatattaaaggccgcaattttaaaatgcgctttatttcc
gaactctag
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