Glaciimonas sp. PAMC28666: JQN73_20460
Help
Entry
JQN73_20460 CDS
T07066
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
glc
Glaciimonas sp. PAMC28666
Pathway
glc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
glc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JQN73_20460
09124 Replication and repair
03420 Nucleotide excision repair
JQN73_20460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glc03021
]
JQN73_20460
03036 Chromosome and associated proteins [BR:
glc03036
]
JQN73_20460
03400 DNA repair and recombination proteins [BR:
glc03400
]
JQN73_20460
Enzymes [BR:
glc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
JQN73_20460
Transcription machinery [BR:
glc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
JQN73_20460
Chromosome and associated proteins [BR:
glc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
JQN73_20460
DNA repair and recombination proteins [BR:
glc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
JQN73_20460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Motif
Other DBs
NCBI-ProteinID:
QRX85093
LinkDB
All DBs
Position
complement(4755674..4757947)
Genome browser
AA seq
757 aa
AA seq
DB search
MTYVVAVRNLCEFTAKCGDLDLRFTPSPSAQDGIAGHGIVRARRKKSYQSEISLSGEAHN
LRVTGRADGYDPDKNQLEEIKTYRGDFNQIPNNHRQLHWAQVKIYGWLFCQERGLSEVRL
ALVYFDIGSQQETEIAELHTADALKIFFDNQCERFSDWADRELLHRASRDQALNALQFPH
AVFRQGQRALAEDVYRATTSGRCLMVQAPTGIGKTIGTIFPTLKACPKQGLDKIFFLTAK
TSGRNLALDALKLIKNSASALPLRVLELVARDKACEYPDKACHGDSCPLAKGFYDRLPMA
RKSAVSAHAMDKAAIRAVALEHQVCPYYLSQDLVRWSDVVVGDYNYYFDLNAMLYGLTVA
NQWRVTVLVDEAHNMVERARQMYSAELEQGDLKRARRDSPPGLKKTLERFNRQWNALHKN
QTTPYLVVSAIPPAFINAMQQTISTVSEYLNDTPVGLDSSLLRFYFDLLHFSHMAALFDS
HSLFDVSKNTEVSGSRAIQSGVSLCLRNIIPGPFLAQRFAAARSVILFSATLTPSNFYSD
TLGLPADTAWIDVQSPFGAEQLSVHIGDISTRYKDREKSLEPIVGLMGNTYNKMEGNYLA
FFSSFDYLQNVADLFANRYPDTPVWIQSRRMGELEREQFLARFSSGSKGIGFAVLGGAFA
EGIDLPGDCLIGAFIATLGLPPLNPVNNQMMQCMSATFGSDLGYDYTYLFPGIRKVVQAA
GRVIRTQLDRGTIHLIDDRFTDPKIVRLLPKWWALEN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacatacgtggtggcggttcgtaacttatgcgaatttaccgccaaatgcggcgatctt
gatttacgtttcacgccatccccctcggcacaggacggcatcgctggtcacggaatcgtt
cgagcgcgccgcaaaaaatcctatcagtcggagatatcgctttctggggaagcacacaat
ttgcgtgttaccgggcgggccgatggttatgatccagacaaaaatcaactcgaagaaatc
aagacatatcgtggcgactttaatcagataccgaacaatcatcgccagctgcattgggcg
caggtaaaaatctacggatggttgttttgccaggaacgtggcctttctgaagtgcgcctg
gcgttggtctattttgacatcggcagtcagcaggaaacggagatagccgagctgcatacg
gcagacgctctaaagattttctttgacaatcaatgtgagcgattttcagattgggcggat
agggagctcttacaccgcgcgtcaagagaccaggcgctaaacgcattgcagtttccgcat
gccgttttccgccagggccaacgcgcattggccgaagatgtttaccgcgccacgacgagt
ggccgatgcctgatggtgcaggcacctacaggcatcggaaaaaccatcggcaccatattt
ccgactttgaaggcctgtcccaaacaaggcctggataagatttttttcttaacggccaaa
acctccggccgtaatctggctttggatgcgctgaaattaattaaaaacagcgcctccgca
ctaccgcttcgcgtacttgagttagtggcacgcgataaagcctgtgaatatccagacaaa
gcttgccatggtgattcttgtccgctcgccaaaggtttttatgatcgtttgccgatggca
cgtaaatctgccgttagcgcccatgcgatggataaagcggccattcgtgcggtggcgctt
gagcatcaggtgtgtccctattatttgagtcaggatctggtgcgatggagcgacgtggtg
gtgggtgactataactactactttgatttgaatgcgatgctatatggactcaccgttgca
aaccaatggcgagtcactgtgctggttgatgaggcgcacaatatggtagagcgtgcgcgc
caaatgtattcggccgaactagagcagggcgatctcaaacgcgcgcggcgggactcaccg
ccaggactcaaaaaaacacttgagcgtttcaaccgtcagtggaatgcgttacacaaaaat
cagacaactccctatctggtggtaagcgctataccgccagcttttatcaatgcaatgcag
cagaccatcagcacagtgtctgaatatctgaatgatacccctgtcggccttgattcctct
ttattgcggttctattttgacttgctccatttctctcacatggcggcgctgtttgactct
cattctttattcgatgtatctaaaaataccgaggtatcaggatcgcgggctatccaaagc
ggggtaagtctttgcctgcgaaatattattccagggccttttcttgcccagcgctttgcc
gcagcgcgctcggtcattttgttctccgctacgttgactccatcaaatttctattctgat
accctcgggctaccagccgatacggcatggatcgacgtgcagtcgccgtttggtgcggaa
caattatctgtgcatatcggcgatatctccacgcgatataaagatcgtgaaaaatcattg
gaaccgatcgtcgggctaatgggtaatacctacaacaaaatggaagggaactacctcgct
tttttcagcagctttgattaccttcaaaacgtagcggacctttttgcaaaccgatatccg
gacacgcctgtatggatacagtcgcgccgcatgggagagttggagcgtgaacagtttttg
gcgcgtttctcatccggtagcaagggcattggatttgccgtactgggtggagccttcgcg
gaaggtattgaccttcccggggactgtctgattggcgcgtttattgccacccttggatta
ccgccgctcaatcccgttaataaccagatgatgcaatgtatgagtgcgactttcgggtcc
gatctcggttatgactatacctacctgtttcctggcattcgcaaagtcgttcaggcagct
ggccgagtcatcagaacccagcttgatcgcggaaccatacatttgatcgatgatagattt
acagaccccaaaattgttcgtcttttgccaaaatggtgggcgcttgaaaattag
DBGET
integrated database retrieval system
