Glaesserella sp. 15-184: CJD39_00330
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Entry
CJD39_00330 CDS
T05643
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
gle
Glaesserella sp. 15-184
Brite
KEGG Orthology (KO) [BR:
gle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gle03021
]
CJD39_00330
Transcription machinery [BR:
gle03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CJD39_00330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
PDZ_2
Flavi_DEAD
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AUI65112
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All DBs
Position
75634..78546
Genome browser
AA seq
970 aa
AA seq
DB search
MSFVVGQRWISESENNLGLGIVTAVDNRTVTLSFPASDEQRVYAVAVAPLTRVQFQKGDR
ITSVDGWQLDVEDVIENQGVALYLGKRVDTQEESVLPEMQLDHKVSFSKPQDRLFSAQID
RSDRFALRYRALKHQQAQFQSALRGMRGIRASLIPHQLHIAKEVGQRLAPRVLLADEVGL
GKTIEAGMILQQQLFAGRVDRVLVLVPESLQHQWLVEMLRRFSLNFSLFDEERCADFTKK
DEDNNDISENPFETESFVIASIDWLATSPQRAKQVLEADWDMLIVDEAHHLEWDEHNPSM
AYQFVAQLSKQIASVLLLTATPEQLGQESHFARLALLDPDRFYDYQAFVAEQKQYQPVAD
AVATLLNDKPLSAKEQESISELLAEEDVEPMFRIINSDASEEQRRDVRQELISELIDRHG
TSRVLFRNTRQGVKGFPHRIYNEIVLEMPSQYANALKVMGMMGGNKMDDLLYPERMFQRM
NPNAKWHEFDPRIEWLITFLKNHRDEKILVICKQADTAIQLEQVLREKEGIRSAVFHEKM
SIVERDKASAYFAQQEEGAQVLISSSIGSEGRNFQFARRLVLFNLPDNPDLLEQSIGRLD
RIGQKHDIEIYVPCFNHSTQMLLAEWYHRGLNAFEETCPMGATLFREFHQELTAFLLNPE
RNEAFESFVEQTHKRQQQLKVELEKGRDRLLELNSNGGETAQQLAQAIAEQDNNPQLVNF
TLNLFDVIGLEQEDLGEKSIVISPTGHMLVPDFPGLSEEGNTVTFDRELALMREDVLFLT
WDHPMIRNGIDLITSGDIGKSAVSLLVNKNLPAGTLLLEAVYIVEAQAPKGLQLTRFLPP
TPVRVLLDSKGNDMASQVSFAGLEKQLKPVNKQMANKIVKMARGDIEKLITLSEAKIAPQ
AQALIAQAKQNADHTLTAELHRLTSLQAVNKNIRADEVNALEQLREKSLEQLEQANWRLD
SLRVIVSNQA
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgtcgtcggacaacgttggattagcgagtcggaaaataacttaggattaggc
attgttaccgcagtggataatcgcactgtgaccctttcatttcctgcatcggacgaacaa
cgtgtgtacgctgttgccgttgcccctttaacccgtgtgcaatttcaaaaaggcgaccgc
atcaccagtgttgatggctggcagttagatgtagaagatgtcattgaaaatcaaggggtt
gcactctatttaggtaaacgtgttgatactcaagaagagagcgttttacctgaaatgcaa
ctcgatcacaaagtcagtttcagcaaaccgcaggatcgtcttttctctgcccaaattgac
cgtagcgaccgttttgctttgcgttatcgtgcattaaaacatcagcaggctcaatttcag
tcggcattgcgtggaatgcgtggcattcgggcaagtcttattccccaccagttacatatc
gccaaagaagtcgggcaacgccttgccccacgcgtgttacttgccgatgaagtcggttta
ggtaaaaccattgaagcgggtatgattttgcaacagcaactgttcgcagggcgagtagat
cgagtgttggtgttagtgccagagagcttgcaacatcagtggttagtggaaatgttacgc
cgttttagcctgaatttctccctgtttgatgaagaacgctgtgccgatttcaccaaaaaa
gatgaagataacaacgacatcagcgaaaatccgtttgagacagaaagctttgtgattgca
tctatcgactggctggcgacttctccacagcgagcaaaacaggtgttggaagcagactgg
gatatgttgattgtcgatgaagctcaccatttggaatgggacgaacataatccgagtatg
gcgtatcagtttgttgctcaattatctaaacaaattgcgtcggtgttactgcttacagca
acccctgaacagcttgggcaagagagccattttgcccgtttagccctgttagatcctgac
cgtttttatgattatcaagcctttgtcgcagagcagaaacagtatcagcctgttgccgat
gcagtggcgaccttgcttaacgacaagccgttgagtgccaaagagcaagaaagtatcagc
gaattgcttgcggaagaagatgttgaaccgatgttccgtatcatcaattcggacgcaagc
gaagagcaacgccgagatgtgcgtcaagagttgattagtgaactgatcgaccgtcacggc
acaagccgagtgctgttccgcaatactcgtcaaggggtgaaaggcttcccacaccgtatt
tacaatgaaattgtgttggaaatgcccagtcagtatgctaacgccttgaaagtaatggga
atgatgggcggaaataagatggacgatctgctctatcctgagcgaatgttccaacgaatg
aacccgaatgccaaatggcacgagttcgacccacgtattgagtggctgattacgttcttg
aaaaatcaccgtgatgagaaaattttggtgatctgtaaacaggcggatacggcaattcag
cttgagcaagtgttgcgtgaaaaagaaggtattcgttcagcggtgttccacgagaaaatg
tcgattgttgagcgtgataaagcgtccgcttactttgctcaacaggaagaaggggcgcag
gtgctgattagctcgagtatcggttcggaagggcgaaacttccagttcgctcgccgtttg
gtgctgtttaatttgcctgataatcctgatttgctggagcaaagtatcgggcgtttagat
cgtatcgggcagaaacacgacattgaaatttatgtgccgtgctttaaccattccacccaa
atgctgttagctgagtggtatcaccgtggcttaaatgcctttgaagagacttgtccgatg
ggggcaacgctatttagagaatttcatcaagaactgaccgctttcttgctcaatcctgaa
cgcaatgaagcctttgagagctttgtggaacagacccacaaacgtcagcaacagcttaaa
gttgaactggaaaaagggcgagatcgcttgcttgaactcaattcaaatggcggtgaaacg
gctcaacaactcgctcaagccattgcagaacaagacaacaatccgcagttggtgaatttt
actttgaatttatttgatgtgatcgggcttgaacaggaagatttaggcgaaaaaagcatt
gtaattagcccaacggggcatatgctcgtgcctgatttcccggggctttccgaagaaggc
aacaccgttacctttgaccgtgaacttgccttgatgcgtgaagatgtactgttcttaacg
tgggatcacccgatgatccgcaacggtatcgatcttattacatcaggcgatattggtaaa
agtgctgtttcgttgctcgtgaataaaaacttgcctgcaggtacgctgttgttagaagcg
gtttacattgtggaagcccaagccccgaaaggcttacagctcacccgtttcctaccgcca
acgccagtacgagtgttgcttgatagcaagggcaatgatatggcatcgcaagtctccttt
gccggtttggaaaaacagctcaagcctgtcaataaacagatggcgaataaaattgtcaaa
atggctcgtggcgatattgagaagttgattacgcttagcgaagcaaaaattgctccgcaa
gcccaagctcttattgctcaagccaaacaaaatgccgatcacactttaacggcagaatta
caccgcttgacatcacttcaagccgtgaacaaaaacattcgtgccgatgaagtcaatgcc
cttgagcagttgcgagaaaaatcgttagaacagcttgaacaagcgaattggcgattagat
agtttaagggtgatagtgagtaatcaggcataa
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