Glaesserella sp. 15-184: CJD39_00510
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Entry
CJD39_00510 CDS
T05643
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
gle
Glaesserella sp. 15-184
Brite
KEGG Orthology (KO) [BR:
gle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gle03009
]
CJD39_00510
Enzymes [BR:
gle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CJD39_00510
Ribosome biogenesis [BR:
gle03009
]
Prokaryotic type
rRNA helicases
CJD39_00510
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
WSD
Motif
Other DBs
NCBI-ProteinID:
AUI65147
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All DBs
Position
122066..123391
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AA seq
441 aa
AA seq
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MNELTTFEELDLSPELLQALEKKGYKRPTAIQQEVIPPALEGRDVLGSAPTGTGKTAAFL
LPALQHLLDHPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTNLKIATITGGVAYQNH
GEVFNTNQDLVVATPGRLQQYINEENFDCRSVEVLIFDEADRMLQMGFGQDAEKIAAETR
WRKYTWLFSATLEGELLVDFAQRILNDPVQIDAEPSRRERKKIQQWYYHADSLEHKTKLL
ARLISEFEIERSIVFVRRREAVRELSETLRKRGIRSTYLEGEMAQTQRNQAIARLKDGVV
NVLVATDVAARGIDIDDVDFVINFDLPYSADTYLHRIGRTARAGKKGSAVSLVEAHDYKL
LGKIKRYTEEPLKPRIVEGLEPRTKAPKDGEVNTVSKKEKARIRKKKEEKKESLKKKVKV
RHKDTKNIGKRRKPTSEKAES
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattaactacttttgaagaacttgatttaagccccgagctgttacaggccttg
gaaaagaaaggctacaaacgcccgacagcgattcaacaagaagtcattcctcctgcgtta
gaagggcgagatgtgttaggctccgccccaacaggaacaggtaagacagcggcatttttg
ttgcctgcgttgcaacatttgcttgatcatccacgccgtaaacctggtccgccacgtatt
ttggttctaaccccaacccgtgagcttgcgatgcaagtggctgagcaagcagaagaactg
gctcaatttaccaacttgaaaattgctacaatcacaggcggtgtggcgtatcaaaatcac
ggggaagtgtttaacaccaaccaagatcttgtggtggcgactccaggacgtttacaacaa
tatatcaacgaagagaatttcgattgtcgctctgttgaagtgctgatttttgatgaagcg
gatcgtatgttgcaaatgggctttgggcaagatgccgaaaagattgcggcagaaacccgt
tggcgtaaatatacttggctcttttcagcgactcttgaaggcgaattgttagtggatttt
gctcagcggattttaaatgaccctgtgcagatcgatgcagaaccaagccgccgagagcgg
aagaaaattcagcaatggtattatcacgccgacagccttgagcataaaactaaattgttg
gctcgtttaatcagcgaatttgagattgagcgaagcattgtgtttgtccgtcgccgagaa
gcggtacgtgagttgagcgaaaccttgcgtaaacgtggtattcgctcaacctaccttgaa
ggtgaaatggcacaaacacaacgcaatcaagccattgctcgtttaaaagatggcgtggtg
aatgtattagtcgcaacggacgtggcggcacgggggattgatattgatgatgtcgatttt
gtgattaactttgacttgccatacagtgccgatacctatttacaccgtatcgggcgtact
gctcgggctggtaaaaaaggctcggcagtgtcgttagtggaagctcacgactacaaattg
ctcggcaaaatcaaacgctatacggaagagccgttaaagcctcgaattgtcgaaggctta
gaacctcgcaccaaagccccgaaagatggagaagtgaatacggtgtcgaaaaaagaaaaa
gcgcgtattcgtaagaagaaggaagagaaaaaagagagcttgaagaagaaggtcaaggtt
cgccataaagatacgaaaaatatcgggaaaagacgtaagcctacttcggaaaaggcagaa
agttag
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