Glaesserella sp. 15-184: CJD39_03715
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Entry
CJD39_03715 CDS
T05643
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
gle
Glaesserella sp. 15-184
Pathway
gle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJD39_03715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gle03019
]
CJD39_03715
Enzymes [BR:
gle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CJD39_03715
Messenger RNA biogenesis [BR:
gle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CJD39_03715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AUI65736
LinkDB
All DBs
Position
complement(806648..807883)
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AA seq
411 aa
AA seq
DB search
MSKHLTEQRFIDFPIHDSVLAALDSKGFEFCTPIQAKTLPYTLAGQDIAGQAQTGTGKTL
AFLVATFHHLLSHEIPTKKNQPRALILAPTRELAVQIASDASMLTQYADLRLALAYGGDG
YDKQLQEIERGVDILVGTTGRVIDYVKQGVIDLDKVQVVVLDEADRMFDLGFIKDIRYLM
RKCPKPEERLTMLFSATLSHRVRELAFEDMHNAEYVEIEPLQRTGHRIKEELFYPSNEDK
MALLLTLMEEEWPDRCIVFANTKHKCEEIWGYLSADGHRVGLLTGDIPQKKRLALLDSFT
QGELDILVATDVAARGLHIPDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACER
YAVNLPAIEEYIGHPIPVSQYDSQVLLDLPKPQRARSKSIASNRRREKSSS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacatctcactgaacaacgttttattgatttccctattcacgacagcgtgtta
gccgctcttgatagcaaaggctttgagttttgtacgcctattcaagcgaaaaccttgcct
tacactcttgcaggacaagatattgcagggcaagctcaaacggggacaggtaaaacctta
gcttttttagtggcaacctttcatcatctactgagccacgaaattccaactaaaaaaaat
cagccgagagccttaattcttgctccaactcgtgaacttgcggtgcaaattgcatctgat
gcgtcaatgctgacccaatatgctgatttgcgtttagcgttggcgtatggcggagacggt
tacgataagcagttgcaagagattgagcgtggtgtggatattttggtcggaacgactggg
cgtgtgattgattatgtcaaacagggcgtgattgatttagataaggtacaagtggtggtg
cttgatgaagcggatcgtatgttcgatcttggctttatcaaagatattcgctatttaatg
cgaaaatgcccgaaacctgaagaacgtttgacgatgctattttctgccacgctttctcac
cgtgtgcgtgagttggcgtttgaagatatgcacaatgcggaatatgtggaaattgagccg
ttacaacgcacggggcatcgcattaaagaagagctgttctatccgtctaacgaagacaaa
atggcgttgttgctcactttaatggaagaagagtggccagaccgttgcattgtatttgcc
aataccaaacataaatgcgaagaaatttggggctatctcagtgctgacgggcatcgtgtc
ggtttgctgacgggcgatattccgcagaaaaaacgcttggcattgctagatagctttaca
caaggcgaattggatattttagtggcgactgatgtggctgcgcgtggtttgcatattcct
gatgtgacccacgtctttaactacgatctgcctgacgaccgagaagattatgttcaccgt
atcgggcgtacagggagagcgggggagagtggtgtttcgattagctttgcttgtgagcgt
tatgcggtcaatcttccggcgattgaagaatatatcgggcatccgattcctgtcagtcaa
tatgacagtcaggtattacttgatctacctaaaccacaacgagcccgttctaagagtatc
gcatcaaatagacgtagagaaaaatcgtcatcgtaa
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