Glaesserella sp. 15-184: CJD39_04945
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Entry
CJD39_04945 CDS
T05643
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gle
Glaesserella sp. 15-184
Pathway
gle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CJD39_04945 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gle03400
]
CJD39_04945 (recD)
Enzymes [BR:
gle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CJD39_04945 (recD)
DNA repair and recombination proteins [BR:
gle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJD39_04945 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
NAT10_TcmA_helicase
AAA_11
UvrD-helicase
Viral_helicase1
SH3_13
SLFN-g3_helicase
DEAD
AAA_22
nSTAND3
AAA_16
PIF1
UvrD_C
TrwB_AAD_bind
Imm71
ResIII
NPHP3_N
AAA_5
HerA_C
Zeta_toxin
CbiA
Motif
Other DBs
NCBI-ProteinID:
AUI67171
LinkDB
All DBs
Position
1082873..1084822
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AA seq
649 aa
AA seq
DB search
MLALLNELKKENIISELNYQFAKLIDRKQQNLGYTLEQQNLAILLSALVSFHVMQGHSCI
RLDSHLANNPFGLQGKNLTRPFYQEILQKIGEISPLAWQETLKEHIAFSQDPEQVAPMLF
QYGRVYFYRYWQAENRIAHYLQQAVSSEQYFANVAQDREILAQFFEPQSEIDWQKVAVAT
ALNNQFCLISGGPGTGKTRTVAILLAALQQKQLKQGLAPLQIALAAPTGKAAARLKESIT
NSLRELNLPQTLQENIPTSATTIHSLIGITPHSDLPRYHAQNPLHLDLLVVDEASMIDMF
VMEKLCNALKPETRLIMLGDKDQLASVEVGNAMAELGDLIQFDYSPEHSDYLTQVTGYPI
FAKTPHVPAICDSLCHLRRSFRFNENSGIGRVAAEVNAKQAVKSWQYFTNADYADLQLHT
YPNITEFSEKSAWIQHCVNMVTQKAVALYRAYLDKVKARTISPEKVSVSEIFAEFQKVRF
LSALRVTELGVERLNQTIAEALQQAGLVQFKHSRDSYIGKPILITENAPQLSIFSGDIGL
ILPDEAGKLRVYFETKKGDKHLELSPSRLPSYEPAYVMTVHKSQGSEFEHALLVMPLNIA
PVLTKELVYTAITRAKSAFTLFSDEKVWKQAVKAEVQRQSGLQIQLLGK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttagccttactgaacgagttaaaaaaagaaaatattatctctgaactcaactatcaa
ttcgccaagcttattgaccgtaagcaacaaaatcttggctatactcttgagcaacaaaac
cttgctattttacttagtgccttggtttcttttcacgttatgcaaggacatagctgtatt
cgcttagattcccacttagctaataatccctttggtttacaagggaaaaatttaactcgt
ccgttctatcaagagattttgcaaaaaattggcgaaatctcaccgcttgcatggcaagaa
accttaaaagagcatattgcttttagccaagatcctgaacaagtagccccgatgttattt
caatatggaagagtgtatttctatcgctattggcaagcagaaaatcggattgctcattat
ctacaacaagcggtcagttcagagcaatattttgcaaatgttgcccaagatcgtgaaatt
ttagcccaattttttgaaccacaatcagagatcgattggcagaaagtcgccgttgctacg
gcgcttaataatcaattttgtttaatttcaggcggtcccggaacaggtaaaactcggaca
gtcgctattttacttgccgccttacaacaaaagcagctaaaacaaggtttagccccctta
caaattgcacttgctgctccaacgggcaaggcagcggctcgcttgaaagaatcaattaca
aacagtttgcgagagcttaatttgccacaaacgttacaagagaatatcccaacatcagcg
acaacgattcactcactgattggcatcaccccacatagtgatcttccccgctatcatgcg
caaaatccgttacatttagatttattagtagtagatgaagcttctatgattgatatgttt
gtgatggaaaaattgtgtaatgcgctcaaaccagaaacccgtttgattatgctaggcgat
aaagaccaactagcctctgtcgaagtcggtaatgcgatggcagaattgggcgacttgatt
caatttgactatagccctgaacatagcgactatttaacgcaagtcacaggctacccgatt
tttgccaaaacgccgcacgtccctgctatttgcgattccctttgtcatttacgtcgtagc
ttccgttttaacgaaaactcaggtattggacgagttgccgcagaagtaaatgcgaaacaa
gcggtcaaatcatggcaatattttacaaatgctgattatgctgacttgcaactacatact
tacccaaacatcaccgaattttctgaaaaaagtgcgtggattcaacattgtgtcaatatg
gtgactcaaaaagccgttgcgctttatcgtgcatatttagataaagtcaaagctcgtacc
atttcacctgaaaaagtttctgtctcagagatttttgctgaatttcagaaagtccgcttt
ttatccgctctgcgtgttactgaactaggcgttgaacgcttaaatcaaaccattgcagaa
gccttacagcaagcggggttagttcagtttaaacatagccgagatagctacataggtaag
ccgattttaatcaccgaaaatgcgccacaactttccatttttagtggtgatattggactg
attcttcctgatgaagcgggcaaacttcgtgtctattttgaaacgaaaaaaggcgataaa
catcttgagctttcaccaagccgattaccaagctatgagccagcctatgtgatgaccgta
cataaatctcaaggctctgaatttgagcatgccttattggtcatgccgttaaatatcgca
cctgttctaaccaaagagttagtctatacggcgattactcgtgcaaaatcagcctttacg
ctatttagcgatgaaaaggtgtggaaacaagcggtaaaagcagaagttcagcgtcaaagc
ggattacaaattcaattactcgggaaataa
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