Glaesserella sp. 15-184: CJD39_08120
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Entry
CJD39_08120 CDS
T05643
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
gle
Glaesserella sp. 15-184
Pathway
gle00550
Peptidoglycan biosynthesis
gle01100
Metabolic pathways
gle01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
gle00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CJD39_08120 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CJD39_08120 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gle01011
]
CJD39_08120 (mrdA)
Enzymes [BR:
gle01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CJD39_08120 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
gle01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CJD39_08120 (mrdA)
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
SURF1
DnaGprimase_HBD
Motif
Other DBs
NCBI-ProteinID:
AUI66544
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Position
complement(1719616..1721568)
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AA seq
650 aa
AA seq
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MIGKLGKLTKPKHYEKVRNGQAELNLFVRRAVVAFIGVLVLTGVLLTNLYHLQIVEYDSY
QTRSNGNRIKLLPVPPTRGVIYDRNGNVLAENLTYFGLYIVPEKVDNLDQTLEELKQLIG
LSDEDIENFRKEKKRASRYTPILLKPDLTEEQMARFAVNQYRFPSMDVHPYFKRNYPYGE
VMTHILGYVAKINDKDKKRLEDAGKYGNYAGTSDIGKLGIEKFYEEQLHGVTGFEEVEIN
NRGKVIRKLRDQAAIPGGSIRLTIDIELQRFVASLLGNQKGAVVVMDPKDSSILAMVTTP
SYDNNLFVDGISGKDYKQLLEDPDRPLYSRATQGTYPPASTIKPFMAVAGLTEGKITPST
TIFDPGFWILPGSTQRFRDWKKSGHGRTDVNKAIVESSDTFFYQLAYDMGIDNMSDWMKK
FGFGVKTGIDLAEESVGIMPSREWKQKRYKKPWLQGDTISVGIGQGYWISTPLQLAKATA
VLINNGKVNTPHLMKEVMSTDITPYKDPLLYEDISDVPSRYWQIAKLGMYNVINAHNGTG
RKAFAGAAYRAAGKTGTAQVFSLNGQNYNAKGLKKDLHDHGWFIGYAPYDNPKVIVSIIL
ENAGGGGSTAAPAARKIMDYALLHLAAPDNLQNIAPKAPLATGAVEELRE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgattggtaaattaggcaaactcacaaagccaaaacattatgaaaaagtacggaatggg
caagcagaattaaatctgtttgttcgtcgtgctgttgtggcttttattggcgtgcttgtt
ttaactggcgtattgctcaccaatctttatcatctgcaaattgtagaatacgattcttat
caaacacgttcaaatggaaatcggattaaattattaccagttccaccaacgcgaggcgtt
atttacgatcgtaatggcaacgttttggctgaaaatttaacctattttggcttgtatatt
gtccctgagaaagttgataaccttgaccaaacattagaagaattaaaacagctcattggg
ctgagtgacgaagatattgagaatttccgtaaagagaaaaaacgagcatctcgttatacg
ccgattctattaaaaccagatttaacggaagaacaaatggcacgctttgctgtgaatcaa
taccgttttccgagtatggacgtacatccgtattttaagcgtaattacccttatggcgaa
gtcatgactcacattttaggttatgtggcgaaaatcaatgataaagataaaaaacgctta
gaagacgcaggaaaatacggaaattatgcgggtacttcggatatcgggaaattaggtatt
gagaagttttatgaagaacagctgcacggtgttacaggatttgaagaagttgaaattaat
aaccgtggaaaagtgattcgtaaattacgagatcaggcggctattcctgggggaagtatt
cgtctaacgatagatatcgaacttcagcgttttgtggctagtttactaggtaatcaaaaa
ggtgctgtggtggtgatggatcctaaagatagtagcatcttagccatggtaactacgcca
agttatgacaataacttgtttgtcgatggtatttcaggcaaagattataagcagttatta
gaagatcctgatcgtccattgtatagccgagctactcaaggaacttacccgccagcctca
acaattaaaccttttatggcagtggcaggattgactgaaggcaaaattacaccaagtaca
acaatttttgacccgggcttctggattttacctggttctacacaacgcttccgtgactgg
aaaaaaagtgggcatggtagaacggatgtgaataaagccatcgttgaatcatcagatacg
ttcttttatcaacttgcctacgatatgggcatagataacatgtcggattggatgaagaaa
ttcggatttggtgttaaaacaggcattgatttagcggaagagtccgttggaattatgcca
agccgtgaatggaagcagaagcgctataaaaaaccttggttacaaggcgatactatctct
gtaggcatcggacaaggctattggatttcgacaccattgcaactagcaaaagcaacagct
gtcttaattaataatggtaaggttaatacgccacatttgatgaaagaagtcatgtccaca
gatattacaccttataaagatccgttgctttatgaagatatttcagatgtgccgagtcgc
tattggcaaattgctaagctaggcatgtataacgtaattaatgcccataatggaacaggg
cgtaaagcttttgctggagcagcttatcgagctgcaggtaaaacaggaacagctcaagtt
tttagcttaaatggacaaaattataatgccaaaggtctgaaaaaagatttacatgaccac
ggctggtttattggctatgcgccttatgataatccaaaagtgattgtttcaatcatttta
gaaaatgcagggggtggtggcagtacagcagctccagcagcaagaaaaattatggactat
gcattattacatttagcagctcctgataatttgcaaaatatagcacctaaggcaccgctt
gcaacaggtgcagtagaggaattacgtgaataa
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