Glaesserella sp. 15-184: CJD39_08395
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Entry
CJD39_08395 CDS
T05643
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
gle
Glaesserella sp. 15-184
Pathway
gle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CJD39_08395 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gle03400
]
CJD39_08395 (recC)
Enzymes [BR:
gle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CJD39_08395 (recC)
DNA repair and recombination proteins [BR:
gle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJD39_08395 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
HCR
Motif
Other DBs
NCBI-ProteinID:
AUI66589
LinkDB
All DBs
Position
complement(1771643..1774912)
Genome browser
AA seq
1089 aa
AA seq
DB search
MFNVYYSNQITEQKNLLTAILARDPNPDPFSKETVLVQSLGMAQWLQMQIASEIGVSGNV
EFPYPTSFLWQQYRVLFPDLPKENPFARSAMQWRLMRLIPQFLDQPNFDALAHYLHTNDQ
LRLYQLAEKIADLFDQYLVYRPQWLVQWEQGRTQAVVDEIVQAVSFKQKNADDIAVNVAW
QSRLWNELVADIKQDSDEMIFNTSHRAYLQQRYFDKLDNLTNAEKARLPKRIFVFGISSL
PHSQLAVLKKFSEHCDIHLFFTNPSLAFWANDREDKILEKLALKQQLSEAELADLFAEQG
NPLLTTWGKQAKEFLNLLIEEGIQDISLYDEFEDENLPLLTQIKKAILYSEHQSDFNFIE
QDNSIQIHACHSKMREVEVLHNQLLWLFENNPDLSPKDIIVMSADIDSYAPYINAVFSRY
ERNDPRSIPFTLSDQKISYIDPIIASFLQLLTIKENKFSAEEILDLFDISAIRENYQFSE
QDIQTLREWIKSSGIRVGLNIENPEWKNYNSWENGLNRLLLGTSLKAENNVWQNVLAFDE
CYGLASELAGNLAKFIDHLTAWHRFICQPQTLSHWKEKLDELITQLYHEDEQSIDAIFTL
KQAVSTLVEQIEQSHFEQAINIDVIAECLAAQLSEQRSNLNFLVGKVNFCTLLPMRAIPF
KVVCLLGMNEGEFPRQQTVNSFDLMQYASQKGDRARRDDDRYLFLEALLSAQQILYISYI
GQSLTSSQEKLPSVLVSQFVDYLTANLPEVQHSKLIIKHPMTVFSPNNFINGKVAYDKEW
LEMKNNQATSQSFLQKLTRDENEIATEIPLHQFIAYLQEPLKYFFQQQLGVRFEKNEDKI
EETEIFQLSGLEKYNLLDDLIQVEDEQIALFFENEKLKGNLPACYFAEINKQQLIEHIQL
LREALSDYLSQEKTVEDIDYSFILAEKKYQLIGNIPHRFDNEIILWRVGGLRDKDIIQAW
VYYLLLKAKNSPINSLCFYYREAEKVKYLSFNGISEEQAKEILNGYLQDYLASQIELKWA
ITHDIQSYFKALKNSENLETNATDLCRNTIELSKDPYIQRVLSQTELINSGEISNRTETW
FRVMLDSME
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgtctattattcaaaccaaatcaccgagcagaaaaacttactcactgctatt
ttagcaagggatccgaaccccgatccgtttagtaaagagacggtgctggtgcagagtttg
ggtatggcacagtggttgcaaatgcagatcgcaagcgaaattggcgtgtcgggcaatgtt
gaatttccttatccgacaagctttttgtggcagcaatatcgggtgcttttccccgatttg
ccgaaagaaaatccctttgctcgttccgcaatgcagtggcgtttgatgcgacttattccg
cagtttcttgaccagccgaattttgatgcccttgctcactatttgcacactaacgaccaa
ctcaggttatatcaactagcggaaaaaattgccgatctgtttgaccaatatctcgtttat
cgtccgcagtggttggtgcaatgggaacagggcagaacacaggcggtggttgatgagatt
gtgcaagcggtttcatttaagcaaaaaaatgcagatgacattgcggtgaatgtggcgtgg
caaagccgcctttggaatgagttggttgctgacatcaagcaagacagcgatgagatgatt
ttcaacacgtctcaccgtgcttatttgcaacaacgttattttgacaagctcgacaatctc
accaacgccgaaaaagcccgtttgccgaagcggatttttgtgtttggcatttcatctctt
ccccattctcaacttgcggtgttgaaaaaattcagtgagcactgcgatattcatctcttt
tttaccaatccaagtctggcattttgggcaaatgatcgggaagataaaattctcgaaaaa
ttagccttaaaacaacaattatctgaagcggaattagccgatttatttgccgaacaaggc
aatccattattaacaacgtggggaaaacaggcaaaagagtttttaaatttattaattgaa
gaaggtattcaagatatttcgctttatgatgaatttgaagatgaaaatttgccattatta
acccaaatcaaaaaagcaattttatattcagaacatcaatccgattttaattttattgag
caagataactctattcaaattcacgcttgccatagcaaaatgcgagaagtggaagtattg
cataatcaactgttatggttatttgaaaataatcctgatttatcgccaaaagatattatt
gtaatgtcagcagatattgacagttacgccccttatattaatgcggtgttttctcgttat
gaacgaaatgatccgagatcaattccctttaccttatccgatcaaaaaatcagttatatt
gatccgattattgcgagttttttacaactattaaccattaaagaaaataaattttcagcg
gaagaaattttagatttatttgatatttcagctattcgggaaaattatcaatttagcgag
caagatattcaaacgttacgagaatggattaaatcatcgggtattcgagtaggtttgaat
atcgaaaaccctgaatggaaaaattataattcgtgggaaaacggattaaaccgtttatta
ttaggcacgagtttaaaagcggaaaataatgtttggcaaaatgtgttggcgtttgatgaa
tgttatggtttagcgtcagagttggcaggaaatttagcaaaatttatcgatcatcttacc
gcttggcatcgctttatttgccaaccgcaaacgctttcccactggaaagagaaactagac
gaacttatcactcaactttaccacgaagatgagcagagcattgatgccattttcacgtta
aaacaagcggttagcacccttgtggagcaaattgaacagagccattttgagcaggcgatt
aacattgatgtgattgccgaatgtcttgccgcacaacttagtgaacagcggagcaactta
aatttccttgtgggcaaggttaatttctgtacgctgttgccgatgcgagccattcctttc
aaagtggtttgcctgttgggaatgaacgagggcgaatttccacgccagcagaccgtcaat
agcttcgacctaatgcaatacgctagtcaaaaaggcgaccgagctagacgagacgatgac
cgctatcttttccttgaagctctgctttccgcccagcagatactctatatcagctatatc
gggcagtcgctcacaagcagtcaagagaagttgccgtccgtattggtatcgcaatttgtc
gattatttgacagcgaatttgcctgaagtccaacattcgaaattaatcataaaacatccg
atgaccgtctttagcccaaataattttattaacggcaaggtagcgtatgataaagagtgg
ttagagatgaaaaataatcaagcgacctctcaaagttttttacaaaaattaacccgagat
gaaaatgagatcgccacagaaattccacttcatcaatttattgcttatttacaagagcca
ttaaagtattttttccaacaacaattaggcgttcgttttgaaaaaaatgaagataaaatt
gaagaaacggaaatttttcaattatcaggtttagaaaaatacaatttacttgatgattta
attcaagtagaagatgaacaaattgccctattttttgaaaatgaaaaattaaaaggcaat
ctgcccgcttgttattttgcagaaataaataaacagcagttaattgaacacattcaatta
ttaagagaagcactgtcagattatttatcgcaagaaaaaaccgttgaagatattgattat
tcctttattttagccgagaaaaaatatcaattaatcggtaacattccacatcgttttgat
aatgagattatattatggcgagtaggcggattacgagataaagatattattcaagcgtgg
gtttattatttgttattaaaagcgaaaaatagcccgataaattcattatgtttttattat
cgtgaagcggaaaaggtaaagtatttaagttttaatggtattagcgaagaacaagctaaa
gagatactcaacggctatttacaggattatttagccagtcaaatagaattaaaatgggcg
attactcacgatattcaaagctatttcaaagcgttaaaaaattcagaaaatctagaaact
aatgcaacagatctctgtcgaaatactatcgaattaagtaaagatccttatatacaacgt
gttctttctcaaacggaacttattaattcaggagaaatctctaaccgtacagaaacatgg
ttcagagtgatgttagatagtatggaataa
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