Glaesserella sp. 15-184: CJD39_09285
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Entry
CJD39_09285 CDS
T05643
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gle
Glaesserella sp. 15-184
Pathway
gle00300
Lysine biosynthesis
gle00470
D-Amino acid metabolism
gle01100
Metabolic pathways
gle01110
Biosynthesis of secondary metabolites
gle01120
Microbial metabolism in diverse environments
gle01230
Biosynthesis of amino acids
Module
gle_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gle00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CJD39_09285 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CJD39_09285 (lysA)
Enzymes [BR:
gle01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CJD39_09285 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AUI66755
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Position
1961558..1962808
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AA seq
416 aa
AA seq
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MDHFHYKNQQLFAEDVAINDIIAQHGTPAYIYSRATLERHWHAFDNAFGAHPHLICFAVK
SNSNIALLNIMARLGSGFDIVSQGELERVLAAGGEASKVVFSGVAKSHSEIARALEVGIR
CFNVESVSELKRINEVAGQLGKIAPISLRVNPDVDAKTHPYISTGLKENKFGVSVKEARE
VYRFAKTLPNVKITGMDCHIGSQLTELQPFLDATDRVIVLMEQLKEDGIELHHIDLGGGL
GVTYTDETPPHPTEYTAALLDKLKAYPNLEIILEPGRAITANAGILVTKVEYIKQNEDRH
FAIVDTGMNDMIRPALYEAYMQIIEVNRPLAAEKAVYDVVGPICETSDFLGKQRELAISE
GDLIAVRSAGAYGATMSSTYNSRPQAVEIMVDGNKAHLIKARASFEELWRLEKLLP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttcactataaaaatcaacaactttttgcagaagatgttgcaattaacgac
atcatcgcacaacacggcacgcccgcttatatttattctcgtgccacattagaacgccat
tggcatgcctttgataacgcctttggcgcacatccgcatttaatctgctttgcggtgaaa
tctaactccaatattgcgttactcaacatcatggctcgtttaggttctggctttgatatt
gtctcgcaaggcgaacttgaacgtgtacttgccgcaggcggtgaagcaagtaaagtggtc
ttttcaggggttgccaaatcacatagcgaaatcgcacgagccttagaagtcgggattcgt
tgttttaacgtggaatcggtttctgaattaaaacgcattaatgaagtggcagggcaactc
ggcaaaattgcgccgatttctttgagagtgaatccagatgtcgatgcgaaaacacaccct
tatatctccacaggtttaaaagagaataaatttggcgttagcgttaaagaagcgcgtgaa
gtttatcgctttgccaaaaccttaccgaatgtaaaaatcacgggaatggattgccatatc
ggctcacagctcacggaattacagccgtttttagatgcaacagatcgcgtgattgtgttg
atggaacagctaaaagaagacggtattgagctacaccacattgatttaggcggcggctta
ggcgtgacttatactgatgaaactcctccacatccaacagaatatacagcggcattactg
gataaactcaaagcttatccaaatcttgaaatcattttagagccagggcgagcgattacc
gctaatgcaggtattttagtcaccaaagttgaatatattaaacagaatgaagatcgtcat
tttgccattgtggatacaggcatgaacgatatgattcgccctgcgctttatgaagcttat
atgcaaattattgaagtaaaccgaccgcttgcagccgaaaaagcggtttatgatgtggtt
ggtccgatttgcgaaacctcagatttccttggcaaacagcgtgaattagctatttcagaa
ggcgatttaatcgccgttcgttctgcaggggcttatggtgcaaccatgtcatcaacctac
aactctcgtccacaagcggtagaaattatggttgatggcaacaaggctcacttaatcaaa
gctcgagccagctttgaagaattatggcgtttagaaaaattgctaccgtaa
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