Glaesserella sp. 15-184: CJD39_09660
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Entry
CJD39_09660 CDS
T05643
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gle
Glaesserella sp. 15-184
Brite
KEGG Orthology (KO) [BR:
gle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gle03016
]
CJD39_09660
Enzymes [BR:
gle01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CJD39_09660
Transfer RNA biogenesis [BR:
gle03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CJD39_09660
Prokaryotic type
CJD39_09660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AUI66827
LinkDB
All DBs
Position
complement(2018981..2019988)
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AA seq
335 aa
AA seq
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MQLAYLFGKPTQAGRLKAEFADFIVKEELGYTLSGEGEFVAVKIRKTDTNTLFVGEKLAE
FAGISAKNMSYAGLKDRHAVTEQWFCLHLAGKETPDFSAFQLEGVEVLEVTRHNRKIRIG
SLSGNHFELLLRDVKQSDDLTARLNQIQAVGFPNYFTEQRFGRDGHNLTQAMRWAKGEIT
VKDRKKRSFYLSAARSEIFNLVVSNRIELGLTQQVLPFDLIQLAGSNSWFVAQPEELNEL
NKRLDLQDILLTAPLVGENSLSQQVSEYEQNIVSAQQDLLALMAKERMSAARRAMFCKPQ
QFEWQFEEAGLRLKFFLDAGSYATALVRELVLVDD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagcctatttattcggcaagcccacgcaagcgggcagattaaaagcagaattt
gccgattttattgtcaaagaagaactcggttataccctttcaggtgaaggggaatttgtg
gcggtaaagattcgtaaaaccgatacgaataccttgtttgtcggcgaaaaattggcagaa
tttgcaggcatttccgccaaaaatatgagctatgcaggcttaaaagatcgccacgccgtg
acagaacagtggttctgcttgcatttggcaggcaaagaaacacccgacttttcagccttt
caacttgaaggtgtcgaagtgttggaagtcactcgccacaaccgcaaaattcgcatcggc
agtctttcaggcaatcactttgagctgttattaagagacgtaaaacagagcgatgatctc
accgctcgtttaaaccaaatacaagcggtcggatttccgaattattttactgaacaacgt
ttcgggcgagacggacataatttgacccaagcaatgcgttgggcgaaaggcgaaattaca
gtaaaagatcgtaaaaaacgcagtttctatctctctgccgctcgcagtgagatttttaat
ttggtcgtttcaaaccgcattgaacttggcttaacccaacaggtgttgccttttgactta
atacaactggctggctcaaacagttggtttgtggcacaacctgaggaattaaacgaattg
aacaagcggttagatttgcaagatattttgctcaccgcaccgcttgtcggcgaaaactct
ttatcacagcaagtgtctgagtatgaacaaaacatcgtttccgcccagcaagatctgttg
gcattaatggcaaaagagcgaatgagtgctgctcgtcgtgcgatgttttgtaagccacaa
cagtttgagtggcaatttgaagaagcaggattacgtttgaaattctttcttgatgcgggc
agttatgcgacagcgttggtgagggagttggttttggtggatgattag
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