Geobacillus lituanicus: GLN3_00225
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Entry
GLN3_00225 CDS
T05193
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gli
Geobacillus lituanicus
Pathway
gli03420
Nucleotide excision repair
gli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GLN3_00225
03430 Mismatch repair
GLN3_00225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gli03400
]
GLN3_00225
Enzymes [BR:
gli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLN3_00225
DNA repair and recombination proteins [BR:
gli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GLN3_00225
MMR (mismatch excision repair)
Other MMR factors
GLN3_00225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
ResIII
Mt_ATP-synt_D
DEAD
NACHT
AAA_29
SLFN-g3_helicase
AAA_11
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASS85701
LinkDB
All DBs
Position
40907..43369
Genome browser
AA seq
820 aa
AA seq
DB search
MQDIIKKEQERLDATISVIDELLEKNKQNMNKTAKDVVEAQLIAYAKKEVKKLQDMRPNP
YFGRLDFEDEFGKETIYIGKKGIEKDGELIVVDWRTDLGRLYNAYQGVQKTFQIGKENRP
VTIHGKRGIVIKNGKVIKVTDIGKSEIVENENGEKVKYMDDYLKEILTNTEEAHRLRDII
ASIQAEQDEIIRLPLKDTIIVQGAAGSGKSTIALHRISYLLYQYHEQVKPKDILILAPNE
IFLSYIKDIVPEIEIEGIEQRTFYDWASTYFTDVHDIPDLHEQYVHVYGSTEKEDLIKIA
KYKGSLRFKKLLDDFVEYIGNTMIPHGDIVIESGVILSKEEIHQFYHAKEHLPLNVRMKE
VKEFILNWSNEQINIRKQQIEDEFEEAYRKWVVTLPEGEERKAVYEALEKAKQLRMKIFQ
EKMQHEISLIVKKMENIPALLMYKSVFQKKVFEKFHPDIDEELLSLLLKNGRQIKQERFM
YEDIAPLIYLDAKINGKKLQYEHIVIDEAQDYSPFQLAIMKDYAKSMTILGDIAQGIFSF
YGLDRWEEIESYVFKEKEFKRLHLQTSYRSTKQIMDLANRVLLNSNYDFPLVIPVNRPGD
APTIKKVESIGELYDEIVNSIRLFEEKGYKKIAILTASKQGAIDTYDQLKRRQITQMEVI
TEGNQALKEKIVIIPSYLVKGLEFDAVIIEDVSDETFKDETQHAKMLYMSITRAHHDLHL
FYRGNISPLLEERDPSAPPKPRKSFADWLITDINDPYVEPQVEAVKRVKKEDMIRLFDDE
EEEFVEEAFEDDRERYYDFHAWLKVWRRWAEMRKQLDEKS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacattataaaaaaagagcaggaacgtttagatgcgacaatatctgttattgat
gagctgttagaaaaaaataaacaaaatatgaataaaactgcaaaagatgttgtagaagca
cagcttattgcatatgccaagaaagaagtaaaaaagcttcaagatatgcggccaaatcca
tattttggacggttagattttgaagacgagtttggaaaagaaaccatttacattggaaaa
aaagggattgaaaaagatggagaattgattgttgttgattggcggacggatttaggaaga
ttatataacgcctaccaaggtgtgcaaaagactttccaaatcggaaaagaaaacagaccg
gtaacaattcatggaaaacgcggtatcgtcattaaaaacggaaaagtgattaaagtaacc
gatattggaaaatcggaaatcgttgaaaatgaaaatggcgaaaaagtcaaatacatggac
gattatttaaaagaaattttgacaaatacggaagaagctcatcgacttcgggatattatt
gctagcattcaagccgaacaagatgaaattatccgcctgccactgaaagatacgattatc
gtccaaggggcggctgggagcggaaaatcaacgattgcactgcatcgcatttcatatctt
ttatatcaatatcacgagcaagtcaaaccgaaagatattcttattttagcaccgaacgag
attttcttatcctatattaaagatatcgtaccggaaatcgaaattgaggggattgagcaa
cgaacattttacgattgggcatctacttattttaccgatgttcatgatattcctgactta
catgagcaatatgtacatgtatacgggtcaacggaaaaagaagacttgataaaaattgct
aaatataaaggatcgcttcgatttaaaaagcttctagatgactttgttgagtacatcggc
aatacgatgatcccgcatggggacatcgttattgaaagcggggttattctttccaaggaa
gaaattcatcaattttatcatgcaaaagaacatttgcctctcaatgtacgcatgaaagaa
gtaaaagagtttatcttaaattggagcaatgaacaaatcaacattcgcaaacaacaaatt
gaagatgaatttgaggaagcgtatcggaaatgggttgtaacgcttccggaaggagaagaa
agaaaagcggtatatgaagcattagaaaaagcaaaacaattgcgtatgaagatctttcaa
gaaaaaatgcaacatgaaatctcacttatcgtgaaaaagatggaaaatatccctgcgttg
ttaatgtataaatcggtgttccagaaaaaagtatttgagaaatttcatccggatatcgat
gaagaattgctaagtcttttgctgaaaaacggaagacaaattaaacaggaacgttttatg
tacgaagatattgctccgctcatttatttagatgcgaaaatcaatggaaaaaaactgcag
tacgaacacattgttattgatgaagcacaagattatagcccatttcaacttgcgattatg
aaagattatgcgaaatcgatgacgatattaggcgatattgcgcaaggaatcttttctttc
tatggacttgaccgttgggaagaaatagaatcgtatgtttttaaagaaaaagagtttaaa
agacttcacttgcagacaagctaccgttcgacaaaacaaattatggatttggccaacagg
gtgttattaaatagcaattatgattttccgcttgttattcctgtaaaccgtccaggggac
gctcctacgattaagaaagtcgaaagcatcggtgaactttatgatgaaatagtaaattca
atacgattatttgaagaaaagggttataaaaaaattgcgattttaacagcgtccaaacaa
ggagccattgatacgtatgatcaattaaagagacgccaaattacgcaaatggaagtgatt
acagaaggaaaccaagcgctgaaagagaaaatcgtcattattccttcctatttagtcaaa
ggccttgagtttgatgcggtgattatcgaagatgttagcgacgagacatttaaagatgaa
acacaacatgctaagatgttgtatatgtctattactcgcgctcatcacgacttacatcta
ttttaccgtggaaatatatcgccgctattggaagaacgagaccctagcgcgccgccaaaa
ccgcgaaaatcgtttgccgactggttaattacggatataaacgatccgtatgtggaacca
caagtggaagcggtaaaacgtgtgaaaaaggaagatatgattcgattatttgatgacgaa
gaagaagagtttgttgaagaagcgtttgaagatgatcgcgaacgatattacgatttccat
gcttggttaaaagtttggcgccgctgggcggaaatgcgaaaacaattagacgaaaaatcg
taa
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integrated database retrieval system
