Geobacillus lituanicus: GLN3_04140
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Entry
GLN3_04140 CDS
T05193
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gli
Geobacillus lituanicus
Pathway
gli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLN3_04140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gli03019
]
GLN3_04140
03400 DNA repair and recombination proteins [BR:
gli03400
]
GLN3_04140
Enzymes [BR:
gli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLN3_04140
Messenger RNA biogenesis [BR:
gli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GLN3_04140
DNA repair and recombination proteins [BR:
gli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GLN3_04140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ASS86376
LinkDB
All DBs
Position
complement(836542..838065)
Genome browser
AA seq
507 aa
AA seq
DB search
MDELTKTLHERFGHASFRPGQRDVIEDVLSGRDVLAMLPTGSGKSLCYQLPAYFLPGSVL
IVSPLVSLMEDQVEQLRRRGEKRVVAFHSLLDAEEKWQALASLPDFRFIYASPEMLQSET
FLAALRRARVSLFVVDEAHCISQWGYDFRPDFLKLGAVRHALGSPPCLALTATATPEVQE
DIIRTLGMERTRRHIYSVDRPNIALAVEHCLSVEDKAARLAECAKRLRGPGIVYFSSRQW
AEEMARRLAQNGAGRVAYYHAGMDGEQRLLVQQQFLYDELDIVCCTSAFGMGVDKGNVRF
VLHFHMPAQLEAYVQEIGRAGRDGAPSLAVLFYADGDRAIAQAVAEAELPDSAALREWCR
RLPEDAVGGGWRAMVDAGGFTDIQKRLLAYFLEWGQTAAPEQLTAAAKERLYERMAAAIE
ARRRWKRKKLREMEEWVHASSCRRAAIVRAFGEELSDKPDACCDNCGLETDRFMADGRRP
EPAPVRPWREELWHMFFGGRRRDEAAK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttggatgaattaacgaaaacattgcatgagcggttcgggcacgcgtcgtttcggcccgga
cagcgcgatgtgatcgaagacgtgctcagcgggcgcgatgtgctggcgatgctgccgact
ggaagcggcaaatcgctttgctatcagctgccggcgtatttcctcccggggagcgtgctc
attgtctcgccgctcgtctccttaatggaagatcaagtcgagcagctgcgccggcgcggt
gaaaagcgcgttgtcgcgttccatagtttgctcgatgcggaagaaaaatggcaagccctc
gcctcgcttccagattttcgctttatttatgcctcaccggaaatgctgcaatctgaaacg
tttttggcggcgctccggcgcgctcgtgtttcgttgtttgtcgtcgatgaggcgcattgc
atttcacagtggggttatgattttcgcccggactttttgaagctcggagcggtccgccat
gcgctcggttcgccgccgtgtctggcgctgacggcgacggctacgccggaagtgcaggag
gacatcatccgcacgctcgggatggagcggacgcgccgccatatttattccgtcgaccgc
ccgaacatcgccttggcggtggaacattgcttatcggttgaggacaaagctgcgcgcttg
gccgaatgcgcgaaacggctccgaggaccggggatcgtgtacttttcaagccggcagtgg
gctgaagaaatggcgcgccggctggcgcaaaacggggcgggtcgggtcgcctattaccac
gccggcatggatggggaacaacggctgcttgtgcagcagcagtttttatatgacgagctc
gacatcgtttgttgcacaagcgcgttcggcatgggggtggacaaaggaaacgtccgtttt
gtgcttcactttcatatgccggcccagcttgaggcgtatgtgcaggaaatcgggcgcgcc
gggcgtgacggggcgccaagccttgcggtattgttttacgcggacggcgaccgggcgatc
gcccaggcggtcgccgaagcggagcttcccgactcggctgcgctccgcgagtggtgccgg
cggctgccggaagacgccgtcggcggtggatggcgcgctatggttgatgccggcggattt
acggacatacaaaaacggctgttggcgtactttttagaatggggacaaacagcggcgccc
gaacagctgacggccgcggcgaaggagcggctgtatgaacggatggccgctgccatcgag
gcgcggcggcgttggaagcgaaaaaaattgcgcgaaatggaggaatgggtgcacgcctct
tcatgccggcgcgcggcgattgtccgcgcgttcggagaggagctatcggacaaaccggat
gcttgctgcgacaactgcggcctggagacggaccgtttcatggcggacggccgccgtccc
gagccggcgcccgtccggccttggcgcgaggagctatggcatatgttttttggcgggagg
cggcgcgatgaggcggcaaagtga
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