Geobacillus lituanicus: GLN3_05275
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Entry
GLN3_05275 CDS
T05193
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
gli
Geobacillus lituanicus
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gli03019
]
GLN3_05275
03009 Ribosome biogenesis [BR:
gli03009
]
GLN3_05275
Enzymes [BR:
gli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLN3_05275
Messenger RNA biogenesis [BR:
gli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GLN3_05275
Ribosome biogenesis [BR:
gli03009
]
Prokaryotic type
rRNA helicases
GLN3_05275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
DUF3391
CMS1
Motif
Other DBs
NCBI-ProteinID:
ASS86582
LinkDB
All DBs
Position
complement(1048097..1049407)
Genome browser
AA seq
436 aa
AA seq
DB search
MTETQFARFSFQPFVIEAIKALRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLL
PIIEKIDPERAEVQAVITAPTRELATQIYHETLKITKFCPKDRMIIARCFIGGTDKQKAL
EKLTVQPHIVIGTPGRINDFIREQALDVHTARTLVVDEADLMLDMGFLVDVDQIAARMPK
ELQMLVFSATIPEKLKPFLKKYMENPTFVQVKPRQAANENIEHVLIPLRGREKARLLHDV
LVSYNPYLAIVFVNTRKMADEVADLLAEQGLKVGVLHGDLTPRERKKVMNQIRDLEFQYV
VATDLAARGIDIEGVSHVVNYELPDDLQFYIHRAGRTARAGYNGIAATIYEPSDQDAIAR
LEKMGISFVHRDLVRGEWKELPPWNRRSKRAGEKKDELAPVIAKLKKAKKVKPGYKKKLR
AELEKKKKRLGRFKQL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacggagacacagtttgcccgtttttcgtttcaaccgtttgtcatcgaagccattaag
gcgcttcgtttttataaaccgacggaaattcaagaacgcatcattccgggggcgttgcgc
ggcgaaagcatggtcggccagtcgcaaaccgggacagggaaaacgcatgcctatttgttg
ccgatcatcgaaaagatcgatccggagcgtgcggaagtgcaggctgtcatcacggcgccg
acgcgcgagctggcgacgcaaatttatcatgagacattgaagattacaaaattttgcccg
aaagaccgcatgatcatcgcccgctgtttcatcggtgggacggataagcaaaaagcgctc
gagaaattgacggtgcagccgcacatcgtcatcggcacgccggggcgcatcaacgatttc
atccgcgagcaggcgcttgatgtgcatacggcgcgcactcttgttgttgatgaggccgat
ttgatgctggatatgggctttctcgtcgatgtggaccaaatcgccgcccgcatgccgaaa
gagttgcaaatgcttgtgttttcggcgaccattccggaaaagctgaagccgtttttgaaa
aaatatatggaaaatccaacattcgtccaggtcaagccgagacaggcggcaaacgaaaac
atcgagcatgtgctcattccgctgcgtgggcgcgagaaggctaggctgcttcatgatgtg
cttgtcagctacaacccgtatttggccatcgtgttcgtcaacacgagaaagatggcggat
gaagtcgccgaccttcttgcggaacaagggctgaaagtcggcgtgctgcacggcgatttg
acgccgcgcgaacgaaaaaaagtgatgaaccaaatccgcgatctcgagtttcaatacgtg
gtcgccaccgatttggcggcgcgcggcatcgacatcgaaggagtcagccatgttgtcaac
tacgaactgccggatgatttgcagttttacatccaccgcgctggaaggacggcgcgcgcc
ggctacaacggcattgcggcgacgatttacgagccgtccgaccaggatgcgatcgcccgc
ctggagaaaatgggcatttcgttcgtccaccgcgatcttgtgcgcggcgaatggaaagag
ctcccgccatggaaccggcggagcaagcgggccggcgaaaagaaagacgaactcgcgccg
gtgatcgccaagctgaaaaaggcgaagaaagtgaagccgggctataagaaaaagctgcgc
gccgagctcgaaaagaagaaaaagcggcttggccgtttcaaacaattgtag
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