Geobacillus lituanicus: GLN3_05760
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Entry
GLN3_05760 CDS
T05193
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gli
Geobacillus lituanicus
Pathway
gli03410
Base excision repair
gli03430
Mismatch repair
gli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GLN3_05760
03430 Mismatch repair
GLN3_05760
03440 Homologous recombination
GLN3_05760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gli03400
]
GLN3_05760
DNA repair and recombination proteins [BR:
gli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GLN3_05760
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GLN3_05760
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GLN3_05760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
YjeF_N
DUF913
Cwf_Cwc_15
Motif
Other DBs
NCBI-ProteinID:
ASS86669
LinkDB
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Position
complement(1141065..1143431)
Genome browser
AA seq
788 aa
AA seq
DB search
MLQAKTRWEVGRPDEQIVQRLAEEASLAPLLARLLICRGVRTAAEAAAFLHPLRQPFHDP
FLLDGMERAIQRLRRAIEAGERILVYGDYDADGVCSTSVMMSALKEAGASVEFYIPNRFT
EGYGPNMAAFRAAKERGVSVIVTVDNGIAAVNEIAAANEWGLDVIVTDHHEPGPVLPKAY
AIIHPKKQGSTYPFRDLAGVGVAFKVAHALLGRVPHHLLDLVAIGTIADLVPLVGENRIL
AAQGLEALRETKRAGLRALWRQCRIDAGALNEQTVGFVIAPRLNAAGRLGGADPAVALLM
TDDEDEAAQLAAEMDELNRERQQLVAQIADEAAEMVRRQFPPEEHRVLVVAGEGWNAGVV
GIVASKLVEQFYRPAVVLAVDREKGIAKGSARSIHGFDLFASLSRCRDLLPHFGGHPMAA
GMTLALDDVEPLRRRLNAIAAETLSDDDLTPLTFIDASCSVAELTLDAARGLERLAPFGV
GNPRPLVLIEGASVETMRRVGANGAHMKAVFAQEGASVDAIGFGLGPLCEEIAPGARVSA
VGELSVNEWNGLAKAQLSLCDLAVSHCQLFDIRGCRDVRPFLERLPKEKRLLVMFRQGTG
ARPDLASFRGELRCVLTDEEAGALEISGRYVVLLDLPPTLGRLAALLGGKEPARIYALFA
QPEARFFRTFPTRDHFKWFYALLHKYRSFPLAERGGQLARARGWTEETVHFMAKVFLELE
FITEQNGVISLVRAPAKRDLHESPTYRRWRDELEVEQQLLYSTYEQLNRCLLDMTRSQTH
EEANVQWI
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagcgaaaacgcgttgggaagtgggtcgccccgacgaacagattgtacagcgg
ctggctgaagaagccagccttgcgccgctgttggcgcggttgctcatctgccgcggcgtg
cgaacggcggcggaagcagctgcgtttcttcatccgcttcggcagccgtttcatgatccg
tttctgcttgatgggatggagcgggccatccagcgcctcaggcgggcgattgaggcgggc
gagcgcattcttgtgtacggcgattacgatgccgatggcgtctgcagcacgtccgtcatg
atgagcgcgctcaaggaggcgggagcgtcagtcgagttctacattcccaatcgctttacg
gaaggatacggcccgaatatggcggcattccgcgccgccaaagagcggggcgtttccgtg
attgtgaccgtcgacaacggaattgcggcggtcaatgaaatcgccgccgctaacgagtgg
gggcttgacgtcattgtgaccgaccatcacgaaccagggccggtgctgccgaaggcgtat
gcgatcattcatccgaaaaagcaaggaagtacatacccgtttcgcgacttggccggcgtc
ggcgtcgccttcaaagtcgcgcatgctctgcttgggcgagtgccgcaccatttgcttgat
ttggtggcgattggaacgattgccgatttagtgccgctcgttggggaaaaccggattctc
gccgcccaaggacttgaagcgctgcgagaaacgaagcgcgccggtctgcgcgccctttgg
cggcaatgccgcattgatgccggcgctttaaatgaacaaacggtcggctttgtcattgcg
ccgcggttgaatgcggccgggcgcctcggcggcgccgacccggcggtggcgctcttaatg
acggacgatgaggacgaagcggcgcaactggcggcggagatggacgagttaaaccgcgaa
cgccagcagttggtggcgcaaattgcggacgaggcagccgagatggtgcgccgtcagttt
ccccctgaagaacaccgcgtgcttgttgtcgccggcgaagggtggaatgccggggtcgtc
ggcattgtcgcctccaagctcgtcgagcagttttaccgtccggcggtggtgctggcggtt
gaccgggaaaaagggatcgccaaagggtcggcacgcagcatccacgggttcgacttgttc
gccagtttgtcgcggtgccgcgacctgttgccgcatttcggcggccatccgatggccgca
ggaatgacgttggcgcttgacgatgtagaaccattgcggcggcggctgaacgccatcgcc
gcggaaacgctgtccgatgacgacttgacgccgctgacgtttattgacgcctcttgttcg
gtcgctgagctgacgctcgacgccgcccgcgggctcgaacggctcgctccgtttggcgtc
ggcaatccgcggccgcttgttctcattgaaggggcgtccgttgaaacgatgcggcgcgtc
ggagcgaacggcgcccatatgaaggcggtgtttgcgcaggagggcgcctcagtcgacgcc
attggttttggcctcggaccgctgtgtgaggaaatcgccccaggggcgcgcgtttcggca
gtcggggagctttccgtgaatgaatggaacgggctggcgaaggcgcagctgtcgctgtgt
gatctggcggtcagccactgccagctgtttgacatccgcggctgccgcgacgtccgtccc
tttcttgagcggttgccaaaagaaaagcggctgcttgtcatgtttcgccaaggaacgggc
gcgcgccctgatttagcctcgtttcgcggggaacttcgctgcgtgctgacggacgaagag
gcgggtgcgctggagattagcggccgttacgttgtgctgcttgatttgccgccgacgctc
gggcggcttgccgccttgcttgggggcaaggagccggcgcgcatttatgcgctgttcgcc
cagccggaagcccgatttttccgtacgttcccgacgcgcgatcattttaaatggttttat
gcgctgttgcacaaataccgttcgttcccgcttgccgagcggggcgggcaattggcgcgc
gcccgcggttggacggaagagaccgttcattttatggcgaaagtgtttttggagttggag
tttattacggagcaaaacggcgtcatttcgctcgtccgcgcgccggcgaagcgcgatttg
cacgaatcgccgacgtaccgccgctggcgggacgagcttgaggtggagcaacagttatta
tattctacttatgagcagcttaaccgctgtttgttggacatgacacgttcgcaaacgcac
gaggaggcaaacgtacaatggatttaa
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