Geobacillus lituanicus: GLN3_06480
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Entry
GLN3_06480 CDS
T05193
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gli
Geobacillus lituanicus
Pathway
gli03030
DNA replication
gli03410
Base excision repair
gli03420
Nucleotide excision repair
gli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GLN3_06480
03410 Base excision repair
GLN3_06480
03420 Nucleotide excision repair
GLN3_06480
03440 Homologous recombination
GLN3_06480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gli03032
]
GLN3_06480
03400 DNA repair and recombination proteins [BR:
gli03400
]
GLN3_06480
Enzymes [BR:
gli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GLN3_06480
DNA replication proteins [BR:
gli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GLN3_06480
DNA repair and recombination proteins [BR:
gli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GLN3_06480
NER (nucleotide excision repair)
GGR (global genome repair) factors
GLN3_06480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
XPG_I
HHH_2
Enkurin
DUF3913
Motif
Other DBs
NCBI-ProteinID:
ASS86802
LinkDB
All DBs
Position
complement(1290517..1293153)
Genome browser
AA seq
878 aa
AA seq
DB search
MMLKNKLVLIDGNSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEQPTHILVAF
DAGKTTFRHETFQDYKGGRQQTPPELSEQFPLLRELLKAYRIPAYELDHYEADDIIGTMA
ARAEREGFVVKVISGDRDLTQLASPQVTVEITKKGITDIESYTPETVAEKYGLTPEQIVD
LKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTVENVLASIDEIKGEKLKENLRQYRDLAL
LSKQLAAICRDAPVELTLDDIVYKGEDREKVVALFQELGFQSFLDKMAVQTDEGEKPLAG
MDFAIADSVTDEMLADKAALVVEVVGDNYHHAPIVGIALANERGRFFLRPETALADPKFL
AWLGDETKKKTMFDSKRAAVALKWKGIELRGVVFDLLLAAYLLDPAQAAGDVAAVAKMHQ
YEAVRSDEAVYGKGAKRTVPDEPTLAEHLARKAAAIWALEEPLMDELRRNEQDRLLTELE
QPLAGILANMEFTGVKVDTKRLEQMGAELTEQLQAVERRIYELAGQEFNINSPKQLGTVL
FDKLQLPVLKKTKTGYSTSADVLEKLAPHHEIVEHILHYRQLGKLQSTYIEGLLKVVHPV
TGKVHTMFNQALTQTGRLSSVEPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQIE
LRVLAHIAEDDNLIEAFRRGLDIHTKTAMDIFHVSEEDVTANMRRQAKAVNFGIVYGISD
YGLAQNLNITRKEAAEFIERYFASFPGVKQYMDNIVQEAKQKGYVTTLLHRRRYLPDITS
RNFNVRSFAERTAMNTPIQGSAADIIKKAMIDLSVRLREERLQARLLLQVHDELILEAPK
EEIERLCRLVPEVMEQAVALRVPLKVDYHYGPTWYDAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgaaaaacaagctcgtcttaattgacggcaacagcgtggcgtaccgcgccttt
ttcgcgttgccgcttttgcataacgataaagggattcatacgaacgcagtctacgggttt
acgatgatgttaaacaaaattttggcggaagagcagccgacccacattctcgtggcgttt
gacgccgggaaaacgacgttccgccatgaaacgttccaagactataaaggcgggcggcag
cagacgccgccggaactgtcggaacagtttccgctgctgcgcgaattgctcaaggcgtac
cgcatccccgcctatgagctcgaccattacgaagcggacgatattatcggaacgatggcg
gcgcgggctgagcgggaagggtttgtagtgaaagtcatttccggcgaccgcgatttaacc
cagcttgcttccccgcaagtgacggtggagattacgaaaaaagggattaccgacatcgag
tcgtacacgccggagacggtcgcggaaaaatacggcctcaccccggagcaaattgtcgac
ttgaaaggattgatgggcgacaaatccgacaacatccctggcgtgcccggcatcggggaa
aaaacagccgtcaagctgctcaagcaattcggcacggtcgaaaacgtactggcatcgatc
gatgagatcaaaggggagaagctgaaagaaaatttgcgccaataccgggatttggcgctt
ttaagcaaacagctggccgctatttgccgcgacgccccggttgagctgacgctcgatgac
attgtctacaaaggagaagaccgggaaaaagtggtcgccttgtttcaggagctcggattc
cagtcgtttctcgacaagatggccgtccaaacggatgaaggcgaaaagccgctcgccggg
atggattttgcgatcgccgacagcgtcacggacgaaatgctcgccgacaaagcggccctc
gtcgtggaggtggtgggcgacaactatcaccatgccccgattgtcgggatcgccttggcc
aacgaacgcgggcggtttttcctgcgcccggagacggcgctcgccgatccgaaatttctc
gcttggcttggcgatgagacgaagaaaaaaacgatgtttgattcaaagcgggcggccgtc
gcgttaaaatggaaaggaatcgaactgcgcggcgtcgtgttcgatctgttgctggccgct
tacttgctcgatccggcgcaggcggcgggcgacgttgccgcggtggcgaaaatgcatcag
tacgaggcggtgcggtcggatgaggcggtctatggaaaaggagcgaagcggacggttcct
gatgaaccgacgcttgccgagcatctcgcccgcaaggcggcggccatttgggcgcttgaa
gagccgttgatggacgaactgcgccgcaacgaacaagatcggctgctgaccgagctcgaa
cagccgctggctggcattttggccaatatggaatttactggagtgaaagtggacacgaag
cggcttgaacagatgggggcggagctcaccgagcagctgcaggcggtcgagcggcgcatt
tacgaactcgccggccaagagttcaacattaactcgccgaaacagctcgggacggtttta
tttgacaagctgcagctcccggtgttgaaaaagacaaaaaccggctattcgacttcagcc
gatgtgcttgagaagcttgcaccgcaccatgaaatcgtcgaacatattttgcattaccgc
caactcggcaagctgcagtcaacgtatattgaagggctgctgaaagtggtgcaccccgtg
acgggcaaagtgcacacgatgttcaatcaggcgttgacgcaaaccgggcgcctcagctcc
gtcgaaccgaatttgcaaaacattccgattcggcttgaggaagggcggaaaatccgccag
gcgttcgtgccgtcggagccggactggcttatctttgcggccgactattcgcaaatcgag
ctgcgcgtcctcgcccatatcgcggaagatgacaatttgattgaagcgttccggcgcggg
ttggacatccatacgaaaacagccatggacattttccatgtgagcgaagaagacgtgaca
gccaacatgcgccgccaagcgaaggccgtcaattttggcatcgtgtacggcattagtgat
tacggtctggcgcaaaacttgaacattacgcgcaaagaagcggctgaatttattgagcga
tattttgctagttttccaggtgtaaagcaatatatggacaacattgtgcaagaagcgaaa
caaaaagggtatgtgacgacgctgctgcatcggcgccgctatttgcccgatattacaagc
cgcaacttcaacgtccgcagcttcgccgagcggacggcgatgaacacaccgatccaaggg
agtgccgctgatattattaaaaaagcgatgatcgatctaagcgtgaggctgcgcgaagaa
cggctgcaggcgcgcctgttgctgcaagtgcatgacgaactcattttggaggcgccgaaa
gaggaaatcgagcggctgtgccgcctcgttccagaggtgatggagcaagccgtcgcactc
cgcgtgccgctgaaagtcgattaccattacggtccgacgtggtacgacgccaaataa
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