Geobacillus lituanicus: GLN3_06835
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Entry
GLN3_06835 CDS
T05193
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
gli
Geobacillus lituanicus
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gli03016
]
GLN3_06835
Enzymes [BR:
gli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GLN3_06835
Transfer RNA biogenesis [BR:
gli03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GLN3_06835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ASS86867
LinkDB
All DBs
Position
complement(1369021..1369599)
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AA seq
192 aa
AA seq
DB search
MKRSHYFIAVPLTSEAKQAIARFSGDASSSLPFRTWVHEEDYHITLAFLGDVPPGKMAPL
CEAMAAVAAKSAPFSLALAGLGTFGERTAPRIFWQGVKEEAALNELRRDVYEACLALGFS
LDRRPFAPHITIARKWQGEAPFQPEALRSLPAASTVFSVPEIVLYRTNMEKTPKYETIAA
FPLLGAPDGRSG
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgaagccattattttatcgctgttccgctgacgtctgaagcgaaacaagccatt
gcccgattttcgggggatgcgtcgtcatcgctgccgtttcgcacatgggtgcatgaagag
gattatcatatcaccctcgcgtttttaggcgatgtgccgccggggaaaatggcgccgctg
tgcgaagcgatggccgccgtcgccgccaaaagcgccccgttttccctcgcgcttgccgga
ctggggacgttcggggagcggacggcgccgcgcattttttggcaaggggtgaaagaggag
gctgcgttgaacgagctgcgacgcgatgtgtatgaagcgtgccttgcgctcggcttttcc
ctcgaccggcggccgtttgccccgcatattacgatcgcccgcaaatggcagggcgaggcg
ccgtttcagccggaggcgctccgttcgcttccagccgcttcgacggtgttttcggtgccg
gaaatcgtgctgtaccggacgaatatggagaaaacgccgaaatacgagacgatcgccgcg
ttcccgttgcttggcgccccggacggccggagcgggtga
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