Geobacillus lituanicus: GLN3_11500
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Entry
GLN3_11500 CDS
T05193
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gli
Geobacillus lituanicus
Pathway
gli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLN3_11500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gli03019
]
GLN3_11500
03009 Ribosome biogenesis [BR:
gli03009
]
GLN3_11500
Enzymes [BR:
gli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLN3_11500
Messenger RNA biogenesis [BR:
gli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GLN3_11500
Ribosome biogenesis [BR:
gli03009
]
Prokaryotic type
rRNA helicases
GLN3_11500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ASS87627
LinkDB
All DBs
Position
2306270..2307673
Genome browser
AA seq
467 aa
AA seq
DB search
MTTFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPI
VEKVDVKNGAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIDRQIRALKKH
PHVIVGTPGRILDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLL
FSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAP
ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGSIEILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKMGVAMTFVTPREIGQLHHIERTTK
RKMERMKPPTLDEALEGQQRIAIEKLLNVAETENLSFYKRAAEELLEEHDSVTLVAACLK
MLTREPDTTPVKLTEEPPLAVKREKKQGGRPDGSARGRTKKRRITAH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgacgacatttcaagaattaggattaagccaagaagtgatgaaagcgatcgagcggatg
gggtttgaagagacgactccgattcaagcaaagacgattccgctcagtctgcaaaataaa
gacgtaatcggtcaagcgcaaaccggaactgggaaaacggcggcgtttggtattccgatt
gtggaaaaagtggacgtaaaaaacggcgccgttcaagcgctcgttgtcgcgccgacgcgg
gagctcgccatccaagtatcagaagagctgtacaaaatcggcgccgtcaagcgcgtgcgc
gtcttgccgatttacggcggtcaagatatcgaccggcaaattcgcgccttgaaaaaacat
ccgcacgtcattgtcggcacgccgggccgcattcttgaccatatcaaccgcggcacgctg
cgtcttgagcacgtgcataccgtcgtgctcgatgaggcggacgagatgctcaacatgggg
tttatcgaggacattgaagcgattttaagccatgtgccggccgagcggcagacgttgctg
ttctcggcgacgatgccggacccgatccgccgcatcgccgagaggttcatgaatgaaccg
gagctcgtgaaggtcaaggcgaaagagatgaccgtgccgaacattcaacagtactactta
gaagtgcacgagaaaaagaaatttgacattttgacgcggcttctcgatattcaggcgccg
gagcttgcgatcgtgttcggccgcacgaagcggcgcgttgatgagcttgccgaggcgctc
aacttgcgcggttatgcggcggaaggcatccacggcgatttaagccaggcgaagcgcctg
tcggtgttgcgcaagtttaaagaaggatcgatcgaaattttagtcgcaaccgacgttgcc
gcgcgcggattggatatttccggcgtgacgcacgtatataacttcgacatcccgcaggat
ccggaaagctacgtccatcggatcgggcggacaggtcgcgccgggaaaatgggtgtggcg
atgacgtttgtcacgccaagggagatcggccaacttcaccatattgagcggacgacgaag
cggaaaatggagcggatgaagccgccgacgctcgatgaggcgctggaaggccaacagcgc
attgccattgagaagcttctcaatgtggcggaaacggaaaacttgtcgttttacaagcgg
gccgccgaggagctgctggaagagcatgattcggtgacgcttgtcgccgcctgcttgaaa
atgttgacgcgcgagccggatactacgccggtaaaattgaccgaagagccgccattagcg
gtcaagcgggagaaaaaacagggcggccgcccggacggctccgcgcgcggacggacgaaa
aaacggcggattacggcgcattaa
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