Geobacillus lituanicus: GLN3_13625
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Entry
GLN3_13625 CDS
T05193
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gli
Geobacillus lituanicus
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gli03400
]
GLN3_13625
Enzymes [BR:
gli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLN3_13625
DNA repair and recombination proteins [BR:
gli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GLN3_13625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DEAD
MRP-S23
Motif
Other DBs
NCBI-ProteinID:
ASS87960
LinkDB
All DBs
Position
2725290..2728811
Genome browser
AA seq
1173 aa
AA seq
DB search
MVVIAVSLRFLLGRSGSGKTAMCLAEIRRKLQEDPRGKTIVYLVPEQMTFQCEYALIHTE
GAGGMIRAQVFSFPRLAWRVLQETGGMNRYHVHDVGVQMMIRKIIEQRKQELKLFGRAAD
KSGFVEQLHEMIAECKRYCLTPDELRRRVEELESGPSRPGRRLLADKLSDVALVYAELER
SLSGHYLDSEDYLRLLAEQIPRSCYLRDADVYIDGFHHFAPQEYIVIEQLLRHCRRVTVC
LTVDRPYDGAMPDELDLFYLPAQTYRQLRELALANDVLLEEPVVLAENRRHQSGALAHLE
AQFHRRPLPPYEAEDGAVCLYEAANRRAELEAVAREIIRLVRDEGARYRDIALVIRQTEA
YRDLVKTVFFDFGIPYFMDEKEPMHHHPLIELVRAALETISTNWRYEAVFRAVKTDLLFP
LDGDLVMWREAADKLENYVLAYGMKGDKWTSGERWPYRRYRALDGLNVPQTDEERQFEDK
LNEWRETLAAPLRRLERRLRRAKDGRGYCTALYLLLEELQIPKKLEQMSAQAEAEGRLVE
ARQHEQVWNAVIDLLDQYVEMLGAEPLSLAEFAKIIEAGLDRLEFSLVPPAIDQVIVAQL
DRSRLIGVKYAFVIGANDGVIPARAKEDGLMAEIEREQLRELGVALAPGSREQLFYDPFF
IYLALACPSERLYVTYPLADGEGKALMPSPLIKQLSELFPKVKVRLCGNDPFDAPEEKAE
AFVTAPQATQTYLVSQLRAWKRNYGIDPLWWDVYNVFIARPEWNERVQKAVSALFYTNKA
APLKKQWSRRLYGKKIQASVSRMEQFQKCPYAHFISHGLRLKERSIFRLEAPDVGQLFHA
AIKQIADRLREQHVDWRELSQPDCERLSDEAVERLAPLIQQQVLSSSSRYEYMKRKLKHV
VARTTHVLSEHARASGFVPIGLELAFGPGGDLPPLRFQLRDGTVMELVGRIDRVDKAESS
EGVFLRIIDYKSSAKTLDLTEVYYGLALQMLTYLDIVLTYAEQLVKQPALPAGVLYFHVH
NPIVKAKQWLDDEAEMAKQLLEPFRMRGLLLADVEAIRLMDSQLEKGQRSLIVPVRLTSS
GAIHSQSSVASASDFDALRQHVRRLFADIGGQIADGIVSIAPYKLKSKTACDFCAFKSIC
QFDEALSGNEFRKLAPQTGEDVMKNITKGRGES
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatcgccgtgtcgcttcgctttttgcttggacgatcgggaagcgggaagacg
gctatgtgtcttgcggaaatccgccgcaagctgcaggaagatccgagaggaaagacgatt
gtttacctcgttccggagcagatgacgtttcaatgtgaatacgccttaatccataccgag
ggagcaggaggaatgatccgcgcccaagtgttcagcttcccccgcctcgcctggcgcgtc
ttgcaggagacgggaggcatgaaccgctaccacgtccacgatgtcggcgtgcaaatgatg
attcgcaaaattattgaacagcggaaacaggagcttaaactgtttggccgcgcggcggac
aaaagcggttttgtcgagcagctgcatgagatgatcgccgaatgcaagcggtattgctta
acgccggacgagcttcgccgccgtgtcgaggagctggaaagcgggccgagccggccggga
cggcgcctgctggccgataagctcagcgatgtcgcgctcgtttatgcagagctcgagcgg
agcttaagcggccattacctcgattcggaagattatttgcgcctgctcgccgaacaaatc
ccccgctcctgctatttgcgcgatgccgatgtttatatcgacggattccatcattttgcc
ccgcaagaatacatagtgattgagcagcttcttcgtcattgccggcgggtcaccgtttgc
ctgacggtcgaccgcccgtatgatggtgcgatgccggacgagctcgacttgttttatctg
ccggcgcagacgtaccgccagttgcgcgagcttgccttggccaacgatgttttgcttgaa
gagccggtcgtgctcgcggaaaaccgacgtcatcaaagcggggcgctcgcccatctcgag
gcgcagtttcatcgccgcccgctgccgccttacgaagcggaagacggtgcggtctgcctt
tatgaggcggccaaccgccgcgcagaactggaagcggtcgcccgggaaatcatccgcctt
gtccgcgacgaaggggcgcgctatcgcgacatcgcgctcgtcatccgccaaacggaggcg
taccgcgaccttgtgaagacggtgttttttgattttggcatcccgtattttatggatgaa
aaagagccgatgcaccatcatccgctcattgaacttgtgcgcgctgctttggaaaccatt
tccacaaactggcggtatgaggcggtgtttcgcgctgtgaagacggatttgctctttccg
ttggacggtgacttggtcatgtggcgcgaggcagccgacaaactcgaaaactatgttctt
gcttatgggatgaagggggacaaatggacgagcggcgagcgctggccgtatcggcgctac
cgggcgcttgacgggttgaatgtgccgcagacggatgaagaacggcaatttgaggacaag
ttgaacgaatggcgggagacgctggccgccccgctccgccgccttgagcgccgtttgcgc
cgggctaaggacgggcgcgggtattgcacggcgctatatctcttgttagaagaattgcag
attccgaaaaagctggaacaaatgagcgcgcaggcggaagcggaaggccgcctcgtggaa
gcgcgccagcatgagcaggtgtggaacgcggtcatcgatttgcttgatcaatacgttgaa
atgctcggagcggaaccgttgtcgttagccgaatttgccaaaattatcgaggccgggctt
gaccggcttgagttctcccttgtgccgccggccatcgatcaagtgatcgtcgcccagctc
gaccgttcgcgcctcatcggcgtgaagtatgcgtttgtcattggcgccaacgatggcgtc
attccggccagggcgaaagaggatgggcttatggcggaaatcgaacgggagcagctgcgc
gaactcggtgtggcgcttgcgccggggagccgggaacagctgttttacgatccgtttttt
atctacctggcgcttgcctgtccaagcgaacggctgtatgttacatacccgctggccgat
ggcgaagggaaagcgctcatgccatcgccgctgattaaacaattgtcggagctgttcccg
aaggtgaaggtgcgcttgtgcggcaacgatccgttcgatgccccggaagagaaggcggag
gcgtttgtgacagcgccgcaggcgacacaaacgtatttggtcagccagctgcgcgcatgg
aagcgaaactatggcatcgatccgctttggtgggatgtgtacaacgtgttcatcgcccgc
ccggaatggaacgagagggtgcaaaaggcggtgtcggcgctgttttatacaaacaaagcc
gcgccgttgaaaaaacaatggagccggcggttgtacggaaaaaaaattcaggcgagcgtc
tcgcgcatggagcagtttcaaaaatgcccgtacgcccattttatttcacacgggctgcgc
ttgaaggagcgaagcattttccgcctcgaggcgccggatgtcggccagttgttccatgcg
gccattaaacaaatcgccgaccggctgcgcgaacagcacgttgattggcgtgaactgtcc
caaccggattgcgagcgtctgtcggatgaagcggtcgaacggcttgcccccctcattcaa
cagcaagtgctgtccagttcgtctcgctatgaatatatgaaacggaaattaaaacacgtt
gtcgcccgcacgacccacgtgttgagcgagcatgcgcgggcgagcggctttgttccgatc
gggctcgagctggcgtttggaccgggcggcgacttgccgccgcttcgctttcaacttcgc
gacgggacggttatggagcttgtcgggcgaatcgaccgcgttgacaaggcagaaagcagc
gaaggagtatttcttcgcatcatcgattacaaatcgagcgccaaaacgcttgatttgacg
gaagtgtattacggtttggcgttgcaaatgcttacctatttggacattgtgctcacgtat
gctgagcaacttgtcaaacagccggcgctgccggctggggtgctctatttccatgtccat
aatccgattgtgaaggcgaagcagtggcttgacgatgaagcggagatggcgaaacaactt
cttgagccgtttcggatgcgcggtctgctgcttgccgatgtggaggcaatccggctgatg
gacagtcaattggaaaaagggcagcggtcgctgattgtgccggttaggctgacgagcagc
ggggcgattcattcgcagtcttcggtcgcgagcgcttctgattttgatgcgcttcgccag
cacgtccgccgtctgtttgccgatattggcggacaaatcgctgacggcattgtatcgatt
gccccgtacaagctgaaaagcaaaacagcgtgcgacttttgcgcctttaagtccatatgc
caatttgacgaggcgctgtccggcaacgaattccgaaagcttgccccacagacgggggaa
gacgtgatgaagaatataacgaaagggaggggagagtcttga
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