Geobacillus lituanicus: GLN3_16505
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Entry
GLN3_16505 CDS
T05193
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
gli
Geobacillus lituanicus
Pathway
gli02020
Two-component system
gli02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GLN3_16505
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GLN3_16505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gli03021
]
GLN3_16505
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gli02035
]
GLN3_16505
Transcription machinery [BR:
gli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GLN3_16505
Bacterial motility proteins [BR:
gli02035
]
Flagellar system
Flagellar assembly proteins
Stator
GLN3_16505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
Homeodomain
Motif
Other DBs
NCBI-ProteinID:
ASS88474
LinkDB
All DBs
Position
3318607..3319362
Genome browser
AA seq
251 aa
AA seq
DB search
MGSALKGEERKYWDDWVNGRDRRAAEELVQRYMPLVSYHVQRLSATLPSSVPKDELISLG
LLGLYDAIEKFDPSRDLKFDTYASFRIRGAILDGLRKEDWLPRSVRDKAKKIEEAAERLE
QQYMRSVTAKEIAAELGMTEAEVQAAASDTFWSLWLPLGQGAAEDEDEPLAIRDDRALLP
EEEAIKREMIDQLAEGIRRLNEKEQLVISLFYKEELTFTEIGSLLQLSTSRISQIHAKAL
WKLRRFLSGDS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgcgctaaaaggcgaagaacggaaatattgggacgactgggtcaacggccgc
gaccgccgcgcggctgaagagctcgtgcagcgctatatgccgcttgtttcctaccatgtg
cagcggctttcggcgacgctgccgagttctgtgccaaaggatgagttgatcagtcttggg
ctcctcgggttgtacgatgcgattgaaaagtttgacccatcgcgcgatttgaaattcgat
acgtatgcatcgttccgcatccgcggcgcgatattggacggtttgcgcaaagaagactgg
ctgccgcgtagcgtgcgcgacaaggcgaaaaaaatcgaggaagcggccgaacggctggag
cagcagtatatgcgatcggtgacagcgaaggaaattgcggctgaacttggcatgacggaa
gcggaagtgcaggcggcggccagcgacacgttttggtcgctttggttgccgctcggacaa
ggagcggctgaagacgaagatgagccgctggcgattcgggacgaccgcgccctgctcccg
gaagaggaagccattaagcgggaaatgatcgaccagttggcggaaggcattcgacggttg
aatgaaaaagagcagctcgtcatcagtttgttttacaaagaagagctgacgtttacggaa
atcggaagtcttttgcagctgtcgacatcaagaatttcgcaaattcatgccaaagcgctg
tggaaattgcgccgctttttaagcggggattcatga
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