Geobacillus lituanicus: GLN3_16605
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Entry
GLN3_16605 CDS
T05193
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gli
Geobacillus lituanicus
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gli03016
]
GLN3_16605
Enzymes [BR:
gli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GLN3_16605
Transfer RNA biogenesis [BR:
gli03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GLN3_16605
Prokaryotic type
GLN3_16605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Ribosomal_S28e
Motif
Other DBs
NCBI-ProteinID:
ASS88493
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All DBs
Position
3339151..3340059
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AA seq
302 aa
AA seq
DB search
MDGVLLLNKPKGITSHDCVAKVRRLLRVKKVGHTGTLDPNVSGVLPLCLGKATRIAEFLT
GATKTYEGEVTLGAATTTEDADGDVVAVRPVERPIARVEIEAVFRRLIGEIEQTPPMYSA
VKVGGKKLYEYARAGIEVERPTRRVTIYELELLDDRELFAGETVSFRFRVTCSKGTYVRT
LAVTVGEQLGYPAHMSDLIRTASGPFRLEDCVTLEEVERRAADGTAAALLIPIEQALFHL
PKYEINDKVAEKVKNGALLRLPAFLHALDGPVVLVTPEREALALYVKHPARPGLMKPLKV
FR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacggggtattgctgctcaacaaaccaaaaggaataacgtcgcacgactgtgtggca
aaggtgcgccgcctgcttagggtaaaaaaagtcggccataccggcacgctcgatccaaac
gtgtccggcgtcctgccgctttgccttggcaaagcgacgcgcattgcggaatttcttacc
ggagcgacgaaaacgtacgaaggggaagtgacgctcggcgcagcgacgacgaccgaagac
gccgacggtgacgtcgttgccgtccggccggtcgagcggccgattgcgcgggtggaaatc
gaagccgttttccgccgccttatcggggaaatcgagcaaacgccgcccatgtattcggcg
gtgaaagtcggcggcaaaaagctgtatgaatatgcgcgcgccggcatcgaggtggagcgc
ccgacgcggcgcgtgacgatttacgagctcgagctgctcgatgatcgcgagctgtttgcc
ggggagacggtgtcatttcgcttccgcgtcacatgcagcaaaggcacgtatgtccgcacg
ctcgcagtgacggtcggcgagcagctcggctatccggctcatatgtccgatctcatccgc
acagcgtccggcccgtttcggcttgaagattgtgtgacgcttgaagaagtcgagcgccgg
gcggccgacggaacggccgccgccttgctcattccgatcgagcaagcgctttttcatttg
ccgaaatatgaaatcaatgataaagtagcagagaaagtaaaaaacggggcgctgctccgg
cttcccgcctttttgcatgcgcttgacgggccggtcgtgctcgtgacgcccgagcgggag
gcgctggccctgtatgtaaagcatccggcgcgcccgggcttgatgaaaccgctcaaagtg
tttcgttga
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