Geobacillus lituanicus: GLN3_16620
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Entry
GLN3_16620 CDS
T05193
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gli
Geobacillus lituanicus
Pathway
gli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLN3_16620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gli03019
]
GLN3_16620
03016 Transfer RNA biogenesis [BR:
gli03016
]
GLN3_16620
Enzymes [BR:
gli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GLN3_16620
Messenger RNA biogenesis [BR:
gli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GLN3_16620
Transfer RNA biogenesis [BR:
gli03016
]
Prokaryotic type
tRNA degradation factors
GLN3_16620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
ATP-grasp
SPATA25
KH_5
KorB
OB_RRP5_4th
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ASS88495
LinkDB
All DBs
Position
3341576..3343735
Genome browser
AA seq
719 aa
AA seq
DB search
MEQEKRVFSIDVAGRPLVIETGELAKQANGAALVRYGDTVVLSTATASREAKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFAEGFRNEVQVVSMVMSV
DQDCSPEVAALIGASTALTISDIPFEGPIAGVIVGRVDGQFVINPTVEQMEKSDLHLVVA
GTKDAINMVEAGADEVPEEVMLEAIMFGHEEVKRLIAFQEEIAAQVGKEKMEVVLYEPDP
ELEAEIRQLAEADIKRAVQVPEKLARDAAIEDVKAGVIAKYEAEEADEEKLKQVQEILHK
LVKEEVRRLITVEKIRPDGRKVDEIRPLSSAVGVLPRTHGSGLFTRGQTQVLSVCTLGAL
GDVQILDGLDLEESKRFMHHYNFPPFSVGETGPMRGPGRREIGHGALGERALEPVVPSER
EFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKQDDHYTILT
DIQGIEDHLGDMDFKVAGTRKGVTALQMDIKIKGLTRDILEEALMQARKGRLEILDHMMQ
TLSEPRKELSKYAPKILIMHINPDKIREVIGPSGKQINKIIDETGVKIDIEQDGTIFISS
VDEAANQKAKQIIEDIVREVEVGKVYLGKVKRIEKFGAFVELFNGKDGLVHISELAEERV
GKVEDVVSIGDEILVKVTEIDKQGRVNLSHKAVLREQRGIAEPPREKRGRRPERQRMKP
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagagaaacgcgtgttttccatcgatgtggctggacgcccgctcgtcattgaa
accggcgaactggcaaaacaggcgaacggggcggcgctcgtccgctacggcgatacggtg
gtgctgagcacggccaccgcatcgcgggaagcgaaaaatgtggactttttcccgctgacg
gtcaactacgaggagcggctgtacgcggtcgggaaaattccgggcgggtttattaaacgg
gaaggccgcccaagcgagaaagcgattttggcgagccggctcatcgaccggccgatccgc
ccgttgtttgccgaaggattccgcaacgaagtgcaagtcgtatcgatggtcatgagcgtc
gaccaagactgctccccggaagtggcggcgttgatcggtgcgtctacggcgttgacgatt
tccgacattccgtttgaaggaccgatcgccggtgtcatcgtcggccgcgtcgatggccag
tttgtcatcaatccgacggtcgagcagatggaaaaaagcgatctgcatcttgtcgtcgct
gggacgaaagatgccatcaacatggtcgaagccggcgcggatgaagtgccggaagaagtg
atgctcgaagcgatcatgttcggccacgaagaagtcaagcggctcattgctttccaagag
gaaattgccgcccaggtcggcaaagaaaaaatggaagtcgtcttgtatgaacccgatcct
gagttggaggcggaaatccgccaacttgcggaagcagatattaagcgggcggtgcaagtg
ccggaaaaactggcgcgcgatgctgccatcgaggatgtaaaagcgggcgtcatcgccaag
tacgaagcggaagaggcggatgaagagaagctgaagcaagtgcaggaaattttgcacaag
cttgtgaaagaagaagtgcgccgtttgattacagttgagaaaatccgtccggacgggcgc
aaagtcgatgaaatccgcccgctgtcgtcggcggtcggcgtcttgccgcgcacgcacggg
tcgggcttgtttacgcgcggccaaacgcaagtgttgagcgtttgtacgctcggggcgctc
ggcgatgtacaaattttggacgggcttgatttggaagaatcgaaacggttcatgcatcat
tacaacttcccgccgttttccgtcggcgaaaccgggccgatgcgcgggccggggcggcgc
gaaatcggacacggcgcgcttggggagcgggcgttggagccggtcgtgccgtcggagcgc
gagtttccgtacacgatccgcctcgtttcggaagtgctcgagtcaaacggatcgacatcg
caggcgagcatttgcgcgagcacactggcaatgatggatgccggggtgccgattaaagcg
ccggtcgccggcattgccatggggctggtgaaacaagacgatcattacacaattttgacc
gacattcaaggcattgaagaccatctcggcgatatggacttcaaagtcgccggcacgaga
aaaggcgtcaccgccctgcaaatggacattaaaattaaagggctgacgcgcgacattttg
gaagaggcgctcatgcaggcgcgcaaagggcgcttggaaattttggaccatatgatgcaa
acgctcagcgagccgcgcaaagagctgtccaaatatgcgccgaaaattttgatcatgcac
atcaatccggataaaatccgcgaggtcattgggccgagcggcaaacaaatcaataaaatc
atcgatgaaaccggcgtgaaaatcgatatcgagcaagacggcacgattttcatctcctct
gtcgatgaagcggccaaccaaaaagcaaagcaaatcatcgaagacatcgtccgcgaagtc
gaagtggggaaagtgtatttgggcaaggtgaaacggatcgaaaaattcggcgcgttcgtc
gagctgttcaacggcaaggacgggctcgtccacatttccgagctggccgaggagcgggtc
ggcaaagtggaagacgtcgtgtcgatcggcgatgaaattttggtgaaggtgaccgaaatc
gataaacaagggcgcgtcaacttgtcgcacaaagcggtgttgcgcgagcagcgcggcatt
gccgagccgccgcgggaaaaacgcggaagacggccggagcgccaacgcatgaagccttag
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