Gloeobacter kilaueensis: GKIL_0223
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Entry
GKIL_0223 CDS
T02885
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
glj
Gloeobacter kilaueensis
Pathway
glj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
glj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GKIL_0223 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glj03400
]
GKIL_0223 (alkA)
Enzymes [BR:
glj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GKIL_0223 (alkA)
DNA repair and recombination proteins [BR:
glj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GKIL_0223 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AGY56470
UniProt:
U5QFL9
LinkDB
All DBs
Position
complement(251232..251849)
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AA seq
205 aa
AA seq
DB search
MTSSTASALIEAVHHLKAADPVLAGVIERVGECQLTVRNTGTHFDAIVRAIVYQQLSGKA
AATIHRRLEALYGGPPLPAQLAASEEAQLRSVGLSRQKLSYLKHFAALVESEQLSIEALD
GLEDQAIIEALTQVRGIGRWTAQMFLLFRLGRLNVLPEADLGVQKGIQLAYGLEKLPTPK
QVIAIAEPWHPFCSVASWYFWRSLD
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtagcactgcgagcgcgctcatcgaagccgtccaccacctcaaggcggcggac
ccggtgctggccggggtgatcgagcgggtcggcgagtgtcagcttaccgtgcgcaataca
ggaacgcacttcgatgcgatcgtacgggcgatcgtctatcagcagctttccggcaaagcc
gccgccacgatccaccggcgcttagaagcgctctacggcggtccaccgctgccggcccaa
ctggccgcgagcgaagaagcccaactgcgcagcgtcggtctttctcgccagaagctctcc
tacctcaagcacttcgcagcgctggtcgaatccgagcaactgtcgatcgaagcgctcgac
gggctcgaagaccaggcgatcatcgaggcgctcacccaggtgcggggcatcgggcgctgg
acggcccagatgtttttgctctttcggctcggacggctcaacgtcttacccgaagcggat
ctgggcgtccaaaaaggcatccagctggcctacggcctggagaagctgcccacgcccaaa
caggtgattgccatcgctgaaccgtggcatcccttttgcagtgtggcgagctggtacttc
tggcgcagcctcgactga
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