Gloeobacter kilaueensis: GKIL_0722
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Entry
GKIL_0722 CDS
T02885
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
glj
Gloeobacter kilaueensis
Pathway
glj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GKIL_0722 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glj03019
]
GKIL_0722 (pnp)
03016 Transfer RNA biogenesis [BR:
glj03016
]
GKIL_0722 (pnp)
Enzymes [BR:
glj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GKIL_0722 (pnp)
Messenger RNA biogenesis [BR:
glj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GKIL_0722 (pnp)
Transfer RNA biogenesis [BR:
glj03016
]
Prokaryotic type
tRNA degradation factors
GKIL_0722 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
AGY56968
UniProt:
U5QDN5
LinkDB
All DBs
Position
768606..770747
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AA seq
713 aa
AA seq
DB search
MIEYRKSVTVHGREIGLSTGVLAQLAGGSVLVQSGETAVLVTATMARQPREGIDFFPLLV
DYEERLYAAGRIPGSFVRREGRPPEKAILAARLIDRPLRPLFPKGFINDVQIVATVLALD
MNVPPDILAILGASSATMLAGIPFDGPVAATRVGLIGDDFIINPTYKEIEDGDLDLVVAG
TKNGIMMVEAGANGLSEEDILDAIDFGYEAVQAMLTAQEEFIKELKVEPLAFTPPANDPV
LVSFVEQKVADPVAEILHSFDLSKDERDKRLDGIEAELKATFETLGEDDPLREKLAANPN
KLGALFKSATKKLMRRQILDEGKRVDGRALGEVRPVSSAVRVIPRVHGCGLFTRGTTQVL
SVVTLGTGSDAQELDDLHPDESKRYMHHYNFPGFSVGEVKPLRGVGRREVGHGALAERAI
VPVLPEYEAFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPLREPVSGVAMGLIKE
GDEVRILTDIQGIEDFLGDMDFKVAGTRDGITALQMDIKIQGITLSIMESALQQAKAGRL
HILEKMLIAIDKPRAELSPYAPRLLTLKIPVDMIGLVIGPGGKTIKRIVEETGAKVDIED
DGTVIVSSVDGAKALAARQIIEGMTRTVEVDKVYLGTVTRIIPNLGAFVEVLPGKEGLVH
ISQLAEHRVRKVEDELNVGDEVVVKVKDIDQKGRINLTRRGIHPSEVEAARGQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagtacagaaagtctgtcacagtccatggacgcgagatcgggttaagtacaggc
gtcctggcacagctggcaggcggatcggtattggtgcagtcgggagagactgccgtttta
gtaactgcgacgatggcccgccaaccgcgcgagggaatcgacttttttcctttgctggtt
gactacgaggagcgcctctacgccgccggtcgcattcccggtagttttgtccgccgcgaa
ggccgcccgcccgaaaaggcaatcctggcagcccgcctcatcgaccgcccgctgcggcca
ctgtttcccaaaggttttatcaacgacgtgcagatcgtggcgactgttctcgccctcgat
atgaacgttccgccggacattctggcgattctcggagcctccagcgcgacgatgctcgcg
ggaattcccttcgatgggccggtagcagcgacccgcgtcggccttatcggcgacgatttc
atcatcaatcccacctacaaggagatcgaagacggggatctcgatctggtggtggccggc
accaaaaacggaatcatgatggtcgaggcgggagcgaacggcctttccgaagaagacatc
ctcgatgcgatcgactttggctacgaggcggtgcaggcgatgctcaccgcccaggaagag
ttcatcaaagaactaaaagtcgaaccgctcgcatttacgccccccgccaacgacccggtg
ctcgtctccttcgtcgagcagaaggtagctgacccggtggcagaaattctccacagtttt
gatctgagcaaagacgagcgcgacaaacggctcgatgggatcgaggcagagctgaaagca
acttttgagaccctgggcgaggacgatccactccgcgagaagctggcggccaatcccaac
aaactcggggcgctttttaagtcagccaccaaaaaactgatgcgcaggcagatcctcgac
gagggcaagcgcgtcgatggccgcgccttgggcgaggtgcgcccggtaagtagtgccgtg
cgcgtcatcccgcgcgtccacggctgcggactgtttacgcgggggacgacccaggtgctc
tcggtggtcactttgggcaccggctccgacgctcaagaactcgacgacctgcacccggac
gagtccaagcgctacatgcaccactacaactttcccggcttctcggtgggcgaggtcaag
cccctgcgcggggtgggtcggcgcgaggtaggccacggagccctggcggagcgggcgatc
gtgccggtgctgccggagtacgaagctttcccctacgtgatccgcgtcgtctccgaggtg
ctctcctccaacggctcgacctcgatgggttcggtctgcggctcgactctagcgctgatg
gacgcgggggtgcccctgcgcgaaccggtctccggggtggcgatgggacttatcaaagaa
ggcgacgaggtgcgcatcctcaccgacatccagggcatcgaagattttctgggcgacatg
gacttcaaggtggccggtacccgcgacgggatcacagccctgcagatggacatcaagatc
caggggattaccctttccatcatggaatcggcgctgcagcaggccaaagccgggcggctg
catattcttgagaagatgctcatcgccatcgacaagcccagagcggagctgtcgccctac
gctccgagactgctgaccctcaagattccggtcgatatgattggcctggtcattggtccc
ggcggcaagacgatcaaacggatcgtagaagagaccggcgcaaaggtcgatatcgaggac
gacggcacggtgatcgtctcctcggtagatggagccaaagccctcgccgcccgccagatc
atcgaagggatgacccgcaccgtcgaggtggacaaagtctacctgggcaccgttacccgg
atcattcccaacctcggtgccttcgtcgaggttctacccggcaaagaagggctggtgcat
atttcgcagctggccgagcaccgggtgcgcaaggtcgaggacgaactgaacgtcggcgac
gaagtggtggtcaaagtcaaggacatcgaccagaaaggccggatcaacctcacccgccgg
ggtatccacccgagcgaggtggaggcagcgcggggccagtag
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