Gloeobacter kilaueensis: GKIL_0987
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Entry
GKIL_0987 CDS
T02885
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
glj
Gloeobacter kilaueensis
Pathway
glj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
glj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GKIL_0987 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glj03400
]
GKIL_0987 (uvrA)
DNA repair and recombination proteins [BR:
glj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKIL_0987 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GKIL_0987 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
nSTAND1
nSTAND3
AAA_25
AAA_21
DnaJ_CXXCXGXG
AAA_23
AAA_22
AAA_18
NACHT
Viral_helicase1
MeaB
cobW
MMR_HSR1
DUF3090
Motif
Other DBs
NCBI-ProteinID:
AGY57233
UniProt:
U5QED0
LinkDB
All DBs
Position
1017166..1020108
Genome browser
AA seq
980 aa
AA seq
DB search
MSGTGNGKDCIYVQGARQHNLKNISLKLPRNQLVVLTGVSGSGKSSLAFDTIFAEGQRRY
VESLSAYARQFLGQLDKPDVDHIDGLSPAISIDQKSTSHNPRSTVGTVTEIYDYFRLLFG
RAGKPFCPICGRPIEPQTVEQIVDQIQQLPEGTRFQLLAPVVRGKKGTHAKLLSALASEG
FVRVRVDGRVLELGEKIELEKNQSHTVEIVVDRLVRRAGIEERLADSLATALERAEGTVV
VELLPRDEEEGERLRQIALKHQLHDSESEVGIEMVFSANYACPIHGSVMEELSPRMFSFN
SPYGACPSCHGLGAIQEFATELVVPDPSKPVAEAILPWADSNNPYYGELLKSLGKQLGFS
PAAPWQMLTRTQQQTILQGSAERLFVDAESFYNGTRGYFTKFEGVIPGLKRRLAEATSDR
VKQKLEQYIVSQPCPECQGTRLKPQVTAVKVSGHSILDFVTVPIDACLAMLDGLALSERQ
ARIAHEVLREIRARLQFLVDVGLEYLTLDRSATTLSGGEAQRIRLATQIGSGLTGVLYVL
DEPSIGLHQRDNERLLRTLFRLRALDNTLLVVEHDEDTMRAADYLIDIGPGAGVHGGQVV
AQGTVEDIIASPASITGAYLGGRRRIETPAIRRAGNGLALAIRGATRNNLQAVDVDIPLG
KFVCITGVSGSGKSTLINEILYPYLKHHLGRTSPRPTGVESVTGIENLDKVIVIDQSPIG
RTPRSNPATYTGAFDAVREVFSMTVEAKARGYEPGRFSFNVKGGRCEACKGEGVNVIAMN
FLPDVYVQCDVCKGKRYNRETLQVKYKNKTISDVLEMTVEEACQFFENIPKAINKLITLQ
QVGLDYIRLGQPAPTLSGGEAQRIKLATELSRRSTGKTLYLLDEPSTGLSFYDVHKLLDV
LQALVETGNTVVVIEHNLDILRVCDWIIDLGPEGGRKGGQIVAAGTPEAVAAVPESYTGQ
FLSRVLQQFPRRAIGSEAAQ
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacgggcaacggcaaggattgtatctatgttcagggtgcccgccagcacaac
ctgaagaacatttcgctcaagcttccccgcaaccagctggtggtgctcaccggcgtctcc
ggttcgggcaagtcctccctcgcctttgacacaatctttgccgaaggccagcgccgctac
gtcgagtctttatctgcctatgcccggcagtttttaggccagctcgacaagccggatgtc
gatcatatcgatggtctcagcccggcgatctcgatcgatcaaaaatctacgtcgcacaac
ccgcgctcgaccgtcggcactgtcaccgagatttatgattactttcggctgctgttcggg
cgggcgggcaagcccttctgtccgatctgcgggcggcccatcgaaccccagaccgtcgag
cagatcgtcgatcaaattcagcagttgccggaaggaacgcgctttcagcttttagcgccg
gtggtgcgcggcaagaagggcacccacgccaagttgctctctgccctcgcttcggaggga
ttcgtgcgggtgcgggtcgatgggcgggttctggagctgggcgaaaagattgaacttgaa
aaaaaccagagccacaccgtcgagatcgtcgtggaccggctggtacgccgggcaggcatc
gaggagcggctcgccgattcgcttgcgacggcgctggagcgggcggaggggacggtcgta
gtcgagcttttgccccgcgacgaggaggagggcgaacggctcaggcagattgccctcaaa
caccagttgcacgacagcgagagcgaagtcggcatcgagatggtcttttcggccaactat
gcctgtccgatccacggctcggtgatggaagaactttcaccgcgcatgttctccttcaat
tcgccctacggtgcctgcccgagctgtcatggcctgggggcgattcaagaatttgcaacc
gagctggtggtaccagacccgagcaagccggtggcggaggcgatcctgccctgggccgac
tcgaacaatccctactacggcgaattgctcaaaagtctcggcaagcaactgggcttctcg
cccgccgccccctggcagatgctcacccgtacccagcagcagacgatcttgcaaggaagt
gcagagcggctgtttgtcgatgccgaatcgttctacaacggcacccgtggctacttcact
aagttcgagggggtgatccccggcctcaagcgccgcctcgccgaggccacctccgatcgg
gtcaagcaaaagctcgaacagtacatcgtctcccagccctgcccggagtgccagggcacc
cgcctcaagccccaggtcaccgccgtcaaggtgtcgggccattcgatcctcgattttgtc
acggtgccgatcgacgcctgcctcgcgatgctcgacggcctggctttgagcgagcgccag
gcgcgcatcgcccacgaggtcctgcgcgagatccgcgcccgcctgcaatttctggtcgat
gtcggcctcgaatacctcaccctcgatcgctcggcgacgacgctctcggggggcgaagcc
cagcgcatccggcttgcgacccagatcggttccggcctcacaggtgtgctctacgtgctc
gacgaaccttcgattggcctccaccagcgcgacaacgagcgattgctgcgcacccttttt
cgcctgcgcgccctcgacaacacgctcctggtggtcgagcacgacgaggacacgatgcgc
gccgccgactacctgatcgacattggccccggtgcgggggtccacggcggccaggtggtg
gcccagggcacggtcgaggacattatcgcaagccccgcgtcgattacgggcgcgtacctg
ggcggacggcggcgtatcgagacaccggctatccgccgtgcgggcaacggcctcgccctc
gccatccggggggcgacgcgcaacaacctgcaggcggtcgatgtcgatattcctctgggc
aagttcgtctgtatcaccggtgtctccggctccggcaaatcgacgctgattaacgaaatt
ctctacccctacctcaagcaccacctcggacgcaccagtccccggcccaccggcgtcgaa
tcggtcacagggatcgaaaacctcgacaaagtgatcgtcatcgaccagtcgcccatcggt
cgcacgccgcgctccaacccggccacctacaccggtgccttcgacgccgtgcgcgaagtg
ttctcgatgaccgtcgaggcgaaggcgcggggctacgaaccgggccgcttctccttcaac
gtcaaggggggccgctgcgaggcgtgcaagggcgagggcgtcaacgtaatcgccatgaat
tttttgcccgatgtctacgtccagtgcgatgtctgcaagggcaagcgctacaaccgcgag
acgctccaggtcaaatacaagaacaagacgatttcagacgtgcttgagatgaccgtcgaa
gaagcctgccagttcttcgagaacatcccaaaagcgatcaataagctcatcaccctccag
caggtgggcctcgattacatccgcctcggccagcccgctcccactctctcgggaggcgag
gcccagcgcatcaaactcgccaccgaactgtcgcgccgttcgaccggtaagacgctctat
ctgctcgacgagccgagcaccggcctatcgttctacgacgtacacaagttgctcgacgtg
ctccaggcgctggtcgagacgggcaacacggtcgtggtgatcgagcacaacctcgacatc
ctgcgcgtctgcgactggatcatcgatctgggtccggaggggggccgcaagggcgggcaa
attgtcgccgccggtacccccgaagcggtcgccgccgtgcccgaatcatacaccggtcag
ttcctgagccgtgtgctccagcaatttccccgccgggccatcggctccgaagccgcccag
tag
DBGET
integrated database retrieval system
