Gloeobacter kilaueensis: GKIL_1049
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Entry
GKIL_1049 CDS
T02885
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
glj
Gloeobacter kilaueensis
Pathway
glj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GKIL_1049 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glj03019
]
GKIL_1049 (rhlE)
Enzymes [BR:
glj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GKIL_1049 (rhlE)
Messenger RNA biogenesis [BR:
glj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GKIL_1049 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HEM4
P-loop_SecA
AAA_22
Fe-ADH
Flavi_DEAD
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AGY57295
UniProt:
U5QI28
LinkDB
All DBs
Position
1081374..1082681
Genome browser
AA seq
435 aa
AA seq
DB search
MTFSQLNLHLALLRGIEEMGFNQPTAIQSEAIPPALAGHDVLACAMTGSGKTAAFLLPIL
QRLLDEPRGTTRALILTPTRELATQIQEHFVQLARHTRLRSAVIMGGVPAAPQIRALKSG
VEVLIATPGRLLDHLDQSYTRLSGLEVLVLDEADRMLDMGFLPAIRQVLSHLPARRQTLF
FSATMPRPIARLAREILKQPFSINQERQAAPATGLTQSAYPVAQELKARLLLQLIAHERM
RQVIVFTRTKHRANRLAELLTAAGVSCDRIHGNRTQAQRTQALESFKSGKCQVLVATDIA
ARGLDIEALGHVVNFDVPQVAEDYIHRVGRTARAERTGDAITFVAPDEEERWRAIERAIG
KRLPRLTLAGFDYKATPAQPLEVPIRERIAAIRSAKTEERARATAKAERKAQRQPAQAHS
RPEAKRPALRKRASA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccttttcacaattgaatctgcacctggcgttgctgcgcggcatcgaggagatgggc
ttcaaccagccgacggcaatccagtctgaggccattcccccagctctggccggccacgat
gtgctggcctgtgcgatgaccggtagcggcaagacggctgctttcttgctgccgattctg
cagcggctactcgatgaaccgcgcgggacgacccgtgccctcatcctcaccccgacgcgg
gaactggcaacccagattcaagaacattttgttcagctcgcccggcacacgcgcctgcgc
agcgcggtgatcatgggcggcgtcccggcagctccccagattcgggcactcaaaagcggc
gtcgaggtgctgattgccacacccggtcgcctgctcgatcacctggaccagtcctacacc
cgtctgtccggcctcgaggttctggtcctcgacgaagcggaccgaatgctggatatgggc
tttttaccggcgatccgccaggtgctttcccatctgcccgcccggcggcagacgctgttt
ttctcggcgacgatgccccggcccatcgcccggctggcaagagaaatcctcaagcagccg
ttttcgatcaatcaggagcgtcaggccgctcccgctaccggcctcacccagagcgcctac
ccggtggcccaggaactgaaggcgaggctgttgctgcagcttattgcccacgagcggatg
cgtcaggtgatcgtcttcacgcgcaccaaacaccgggcaaaccggctggctgaattgctc
accgccgccggagtaagctgcgatcgcatccacggcaaccgcacccaggcccagcgcacc
caggcgctcgaaagcttcaaaagcggcaaatgccaggttcttgtagcgaccgatatcgcc
gcacggggcctcgatatcgaagcgctcggccatgtcgtcaacttcgatgtgccccaggtg
gccgaagattatattcaccgcgtcggtcgtaccgcccgtgccgagcgcaccggcgatgcg
atcaccttcgtcgcccccgacgaggaggagcgctggcgagcgatcgagcgggcaatcggc
aagcgcctgccccggctgacgctcgccggtttcgactacaaggcgacccccgcccaaccg
ctggaggtaccgatccgcgagcggatcgccgcgatccgctctgccaagacggaggagcgg
gcgcgggctacagccaaagccgagcgcaaggcccaacggcaaccggcccaggcccattcc
cggccagaggcgaagcggcctgcgctcagaaaacgggcctcggcctga
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