Gloeobacter kilaueensis: GKIL_1149
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Entry
GKIL_1149 CDS
T02885
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
glj
Gloeobacter kilaueensis
Pathway
glj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
glj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GKIL_1149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glj03021
]
GKIL_1149
Transcription machinery [BR:
glj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GKIL_1149
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_10
HNH_repeat
DUF7443
Motif
Other DBs
NCBI-ProteinID:
AGY57395
UniProt:
U5QIC1
LinkDB
All DBs
Position
1176604..1177551
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AA seq
315 aa
AA seq
DB search
MMLVTGIALWHGVSVVADSGQGKAVEVRKTRQSATFERDSVGLYLQEIGRIPLLKPEEEV
MLARAISQGGPRGEWAKRKLVQANLRLVVSIAKKYLNRGVPFLDLIQEGSLGLIRAAEKF
EHERGYKFSTYAYWWIRQAITRAVASQARTVRLPVHLVEKINRVKKVRRSLAQDLGRTPS
QAELAEALELSEDDLEHILRAARRTVSLNITVGKEEDTELIHLIEDSQTDQPDVYIDRES
MRVEVGDLLDRHLTPRERDILQLRFGLRDGQQRTLDQVGKMFDLSRERIRQIQAKAFRKL
RRVRQRQRLQDWIGI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatgttggtcacggggatcgcactatggcatggggtatcggtcgtggcagattcagga
cagggcaaggcagttgaagttcgcaaaacccggcagagcgcaacattcgagcgagactcg
gttggactctacctgcaagaaattggccgcattcctctgctcaagccagaagaggaagtg
atgctggcgcgggccatctcccagggcgggccgcgcggcgagtgggcaaagcgcaagctg
gtgcaggccaacttgcggctggtggtttcgatcgccaagaagtacctcaaccggggtgta
ccgtttctcgatctgattcaagaagggtcgctggggctcatccgggccgccgaaaagttc
gagcacgagcgcggctacaagttttcgacctacgcctactggtggattcgccaggcaatc
acaagggcggtggcctcccaggcgcgcacggtgcggttgccggtgcatctggtcgaaaag
atcaaccgcgtcaagaaggtacgccgttccctcgctcaagatctgggccgcacgccgagc
caggcggaactggccgaggcgctcgaattgagcgaggacgatcttgagcacatcttgcgg
gcagccaggcggacggtatcgctcaacatcaccgtcggcaaagaagaagacaccgagctg
attcacctcatcgaagacagccagaccgatcagcccgacgtctacatcgaccgcgaatcg
atgcgcgtcgaggtgggcgacctgctcgatcggcacctcaccccccgcgagcgcgatatt
ttgcagttgcgcttcgggttgcgcgacggccagcagcgcaccctcgatcaggtgggcaag
atgttcgatctctcccgcgagcgcatccgccagatccaggccaaagccttccgcaaactg
cgccgggtgcgccagcgccagcgcctccaggactggattggtatttag
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