Gloeobacter kilaueensis: GKIL_1920
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Entry
GKIL_1920 CDS
T02885
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
glj
Gloeobacter kilaueensis
Pathway
glj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
glj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GKIL_1920 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glj03021
]
GKIL_1920 (rpoA)
03400 DNA repair and recombination proteins [BR:
glj03400
]
GKIL_1920 (rpoA)
Enzymes [BR:
glj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GKIL_1920 (rpoA)
Transcription machinery [BR:
glj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GKIL_1920 (rpoA)
DNA repair and recombination proteins [BR:
glj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GKIL_1920 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
DUF2125
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AGY58166
UniProt:
U5QGU2
LinkDB
All DBs
Position
complement(2017374..2018318)
Genome browser
AA seq
314 aa
AA seq
DB search
MAQYTIECVETRTEADSGQYGKFVLEPLERGQGTTLGTALRRVLLANLEGTAVTALRITG
VNHEFATIKGIREDVLDILLNMKELVLRSYTGDIQIGRLAVQGPRRVTASDLELPAEVQV
VNPRHYIATLAEDGQLEMEFQIERGKGYRSIERGSEDGASIDYLSIDAIFMPVRKVNWTV
ESVSNNGSGEQDRLTIEIWTSGSLSPQEALSQAAKILVDQLRPLQEITFEPPVEPTRPQS
NTVGQVPIEELQLSVRAYNCLKRAQINTVADLLEYTEEDLLEIKNFGQKSAEEVIEALQE
KMGLSLPKDKPGRS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatatacgattgagtgcgttgagacacggaccgaggccgacagcggccagtac
ggcaaatttgtcctcgaaccgctcgagcgcggccaggggacgaccctgggaacggcgctc
aggcgcgttttgcttgcgaacctcgaaggcacggcggtcaccgccctgcgcatcaccggg
gtcaaccacgaatttgcgacgatcaagggcatccgcgaggatgtgctcgacattttgctc
aacatgaaggagctggtgctgcgctcctacaccggcgacattcagattggccggttggcc
gtgcagggtcccaggcgggtcaccgcctcggatctggaactgcccgccgaggtgcaggtg
gtcaacccgcgccactacattgccaccctcgccgaggatggccaactcgagatggaattt
cagatcgagcgcggcaagggctaccgctcgatcgagcgcggcagcgaagacggcgcatcg
atcgattatctgtcgatcgacgcgatctttatgccggtgcgcaaggtcaactggaccgtc
gagagcgtcagcaacaacggcagcggcgagcaggaccggctcaccatcgagatctggacg
agcggctcgctttctcctcaagaggcgctctcccaggcggccaagattctcgtcgatcaa
ctgcggcccttgcaagagattaccttcgagccgccggtcgaacccacccggccccagagc
aacaccgtaggccaggtgcccatcgaagaattgcagctgtcggtgcgcgcctacaactgc
ctcaagcgcgcccagatcaacacggtggccgacctgctcgagtacaccgaagaagatctg
cttgagatcaaaaactttggccaaaagtccgccgaagaagtgatcgaagcgctgcaagaa
aagatgggcctcagccttcctaaagacaaaccgggcaggagctaa
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