Gloeobacter kilaueensis: GKIL_3122
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Entry
GKIL_3122 CDS
T02885
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
glj
Gloeobacter kilaueensis
Pathway
glj03420
Nucleotide excision repair
glj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
glj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GKIL_3122 (uvrD)
03430 Mismatch repair
GKIL_3122 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glj03400
]
GKIL_3122 (uvrD)
Enzymes [BR:
glj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GKIL_3122 (uvrD)
DNA repair and recombination proteins [BR:
glj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKIL_3122 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GKIL_3122 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Viral_helicase1
AAA_12
ResIII
CarD_TRCF_RID
DEAD
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AGY59368
UniProt:
U5QKI6
LinkDB
All DBs
Position
3301412..3303784
Genome browser
AA seq
790 aa
AA seq
DB search
MVLGKDALLNPTQRRAVERFNGPLLVVAGAGSGKTRILTYRIAHLIETYQVEPEHILAVT
FTNKAAGEMKERILQLFCERAARNRTGSAYLDLSEAEQREIGSRVRAELIQPLWVGTFHA
LCARMLRYDIDKYTGEGGQSWQRNFTIFDESDVQEIVKEIVTKELNLDDRMYQPRSVRFA
ISAAKNRGLTAEEYAAEEGSRRARTIAGVYERYQQQLARNNALDFDDLIRVPVQLFRQRP
EVLDYWHRRFHHILVDEYQDTNRTQYELIRLLATNNRPRSEWDWRDRSVFVVGDADQAIY
SFRQADFRILMDFQSDFGDGQSDDKTETLIKLEENYRSSATILDIANDLIANNVERIDKV
LRPTRPAGKPVTLHEAEDEVAEAEYIVSQMRALKNSESRSWRDFAVLYRVNAQSQPIEQA
LARWGVPYAVVGGLRFYDRREIKDVLSYLKAIHNPADSLALKRAMSIPRRGIGKTTLDKL
EAGAGMLQTSLWELLADQSSIQNLAGRTSGPILQFVRFIGRMQELAATGSVSQLLDTVLE
ESGYVRMLQEEGSEEAENRLENVLELRSVAQRFEEENDDPAAATLEAFLANVSLASDLDS
LDESADHISLMTLHAAKGLEFPVVFLCGLEDGLFPHFRAIQDGDSAAIEEERRLCYVGIT
RAKEHLFLSYAQARRLYGDRQSAIASQFLKELPADKLAGSKLRKGFTPGGRTRAQAQLSA
TRPAAAPAPTRRKQPAQSWAVGDRVEHEQFGPGQVTHVLGEGARQYLAISFPGQGKKIID
PRLAVLRKVE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggtcctggggaaagatgcattactgaaccctacgcagcggcgggcggtcgagcgcttc
aacgggccgttgctggtcgtcgctggtgccggaagtggcaagacgcgcattctcacctac
cgcatcgctcacctcatcgaaacctatcaagtcgagccggagcacattctggcggtcacc
ttcaccaacaaggccgcaggcgagatgaaggagcgcatcctgcagcttttttgcgagcgg
gcggcccgcaaccgcaccggcagcgcttacctcgatctgagcgaagctgagcagcgcgag
atcggatctcgggtgcgcgctgaactgattcagccgctgtgggtcggcacctttcatgcc
ctgtgcgcccggatgttgcgctacgacatcgacaagtacaccggcgaggggggccagagc
tggcagcgcaactttacgatcttcgacgagtcggacgtgcaggagatcgtcaaggagatc
gtcaccaaagaactcaacctcgacgatcgaatgtatcagccgcgctcggtgcgctttgcg
atcagcgccgctaaaaaccggggcctcacagccgaggaatacgcagccgaggagggcagc
cgccgcgcccggacgatcgcaggagtctacgagcgttaccagcagcaactggcgcgcaac
aacgccctcgacttcgacgatctgatccgcgtgccggtgcagctttttcggcagcgcccc
gaggtgctcgactactggcatcggcgctttcatcacatcctggtcgatgagtaccaggac
accaaccgcacccagtacgagctgattcgcctgctcgccaccaacaatcgtccccgatcg
gagtgggactggcgcgaccgctcggtgttcgtggtgggcgacgccgatcaggcaatctac
agttttcgccaggccgactttcggatcttgatggattttcagtccgactttggcgacggc
cagtccgacgacaagaccgagacgctgatcaagctcgaagaaaactaccgctcctcggcg
acgatcctcgacatcgccaacgacctgatcgccaacaacgtcgagcgcatcgacaaggtt
ctgcgccccacccggcctgccggtaaaccggtcaccctgcacgaggcggaggacgaagtg
gccgaggccgagtacatcgtctcccagatgcgggcgctcaaaaacagcgaaagccgctcc
tggcgcgattttgccgtactctatcgagtcaatgcccagtcccagcccatcgagcaggcg
ctcgcgcgctggggggtgccctacgcggtggtgggcggcctgcgcttctacgaccgccgc
gagatcaaggacgttttaagttacctcaaggcgattcacaatccggcggactccctcgcc
ctcaagcgggcaatgtcgattccgcgccgggggatcggcaagacgaccctcgacaagctc
gaagccggtgccggaatgctccagacttcactctgggaattgctcgccgatcaaagcagc
atccagaatctggcggggcggacgagcgggccaatcttgcagttcgtgcgctttatcggt
cggatgcaggagctggctgccaccggcagcgtctcgcagttgctcgacaccgtgcttgag
gaatccggctacgtgcggatgcttcaagaagaaggcagcgaggaggccgaaaatcgcctc
gaaaacgtcctcgagttgcgctcggtggcccagcgcttcgaagaagaaaacgacgatccg
gctgccgctaccctcgaagcgtttctggccaacgtttcgctcgcctcggacctcgatagc
ctcgatgagagcgccgatcatatttcgctgatgaccctgcacgccgccaaggggctcgaa
tttccggtcgtctttctgtgcggcctcgaggacggtctttttccccattttcgggcgatt
caagacggcgacagcgccgccatcgaggaggagcggcggctctgttacgtcgggatcacc
cgcgccaaagaacacctgtttttaagctatgcccaggcgcgcaggctctacggcgaccgc
cagagcgccatcgcctcgcagtttctcaaagaactgcccgccgacaagctggctggatcc
aagctgcgcaagggtttcacgccgggtgggcgcacccgcgcccaggcccaactttctgct
accaggcccgccgccgctcctgctcctacccgccgcaagcaaccggcccagtcctgggcg
gtgggtgacagggtcgaacacgaacaatttggcccaggccaggtaacccacgttttagga
gaaggagccagacagtacctggccatcagctttcccggccagggcaagaagatcatcgac
ccgcgcctcgcggtgctgcgcaaggtggagtga
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integrated database retrieval system
