Gloeobacter kilaueensis: GKIL_3218
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Entry
GKIL_3218 CDS
T02885
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
glj
Gloeobacter kilaueensis
Pathway
glj03410
Base excision repair
glj03430
Mismatch repair
glj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
glj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GKIL_3218 (recJ)
03430 Mismatch repair
GKIL_3218 (recJ)
03440 Homologous recombination
GKIL_3218 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glj03400
]
GKIL_3218 (recJ)
DNA repair and recombination proteins [BR:
glj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GKIL_3218 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GKIL_3218 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GKIL_3218 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AGY59464
UniProt:
U5QPD9
LinkDB
All DBs
Position
complement(3394406..3396739)
Genome browser
AA seq
777 aa
AA seq
DB search
MLPRQRWQIAAPVPDLAARLAGAFGLSPLVAQVLINRGITTCELAEHFLSPDSWVLPEPG
AEFAQMGRAVELLAEAIVHNKPIAICGDYDCDGMTSTALLLRAVRALGGQIDYAIPSRMH
EGYGINCRIVEEFFDRGVGLILTVDNGISAHGPIARAAELGMQVIVTDHHDLPDVLPVAD
AILNPKLMERTSPYAYLAGVGVAFVLAGELARRFEDNGDLQESLLELFTLGTVADLAPLV
GVNRAWVLRGLARLPGSTNPGVQALLAVCGLLGRNDLKPEAIGFALGPRINAVGRIGDPV
TVIELLTTDDPAVAAERAGECEQANQRRQVLCAQIEAEAIALVEAQQKDGLDLAQQRVLV
LAQPGWHHGVIGIVASRLKERYGAPVFIAAIEGERVRGSARGIPEFHIYEALKFCADLLD
GFGGHPMAGGFSLRGDQLEAFKVRLQDFARARLQPEQIAPLVEIDAAVQLAQINRALVEQ
LDRLQPCGLGNREPVFWVAGARVVQQKAMGKEGTHLQLLVSDGTAERRAVGWRQADYLPL
PEFVDIAFSARRNEYQGTVKIELEVAGLRAATAAPFVLPAPPAFEESIEWHDHREGDGAA
FLATFVPDQQRPVLLYGHERPQLPPGWPVHYDRPQENYRYEHLLLWSLPPSPLHLLWLLA
VVRPRTVHLFAATVPAFHPWKLRHQLQASYRPGLPFEILRLSQHCWVSPRIVCEALVEER
FLEDWRPVIDANLHGWLGAERLQLAEWYQSRADVLQELLRRPASLLQPLARSCDSLC
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgctacccaggcagcgctggcagattgccgctcccgttcccgacctggccgcacggctg
gccggagccttcgggttgtcgccgctggtggcccaggtgctgatcaatcgcgggatcacc
acctgcgagctggccgagcactttttatcgcccgacagctgggtgctgccggagcctggg
gcagaatttgcccagatgggccgggctgtggagctgctggcggaggcgatcgtccacaac
aagcccatcgccatctgcggcgactacgactgcgacggcatgacgagcacggctttactc
ctgcgggcggtgcgcgccctgggcgggcagatcgattatgcgatccccagccggatgcac
gagggctacggcatcaactgccggatcgtcgaagaattttttgatcgcggcgtcggtctg
attctgaccgtcgataacggcatctccgcccacggaccgatcgcccgcgccgccgagttg
ggtatgcaggtgatcgtcactgaccaccacgacctgccggatgtgctgccggtggccgac
gcgattctcaaccccaagttgatggagcgcacctcgccctacgcctatctggccggagtc
ggggtggcctttgttctggccggagaacttgcccgccgcttcgaagacaacggcgatctg
caggagagtttgctggaactatttaccctcggaacggtggcggatcttgctccgctggtc
ggtgtcaaccgggcctgggtgctgagggggctggcgcgcttgcccggttcgaccaatccc
ggcgtgcaggcgctactggccgtctgcggtctgctcgggcgcaacgatctcaagcctgag
gcgatcggttttgccctgggcccccggatcaacgctgtgggccgcatcggcgatccggtg
acggtcatcgagctattgaccaccgacgatccggcggtggccgccgagcgggccggcgag
tgcgaacaggccaaccagcgccgccaggtgctctgtgcccagatcgaggccgaggcgatt
gcccttgtcgaggcccagcaaaaagacgggctcgacctggctcagcagcgggtgctggtg
cttgcccagcctggctggcaccacggtgtaatcgggatcgtggcaagccgcctcaaggag
cgctacggagctccggtctttatcgcggccatcgagggcgagcgggtgcgcggctcggcg
cgggggattcctgaatttcacatctacgaggcgctcaagttctgcgccgatctcctcgac
ggcttcggcggccatccgatggcggggggcttttcgctcaggggcgatcagcttgaagct
ttcaaggtgcggctgcaggattttgcccgcgcccgcctccagcccgagcagatagcgccg
ctcgtagagatcgacgcggcagtgcagcttgcccagatcaaccgcgcactcgtcgagcag
ctcgaccggctgcagccctgcggcctcggcaaccgtgaaccggttttctgggtagccggg
gcacgggttgtccagcaaaaggccatggggaaggagggtacccacctgcagcttttagtg
agcgacggtaccgctgagcggcgggcggtgggctggcggcaggcggactatctgccgctg
cccgaattcgtcgatatcgcctttagcgccaggcgcaacgagtaccagggcaccgtcaag
atcgaactggaagtggcgggcctgcgcgctgccactgccgccccgtttgtcctgccggct
cctccggcttttgaggagtccatcgagtggcacgaccaccgcgagggcgacggcgctgca
tttctggcaacttttgtgcccgatcaacaaagaccggtgctcctctatgggcacgagcgt
ccccagttgccccctggctggccggtccactacgaccgcccccaggagaattaccgctac
gagcacctgctgttgtggagcctgccgccctcgccgctgcacctgctctggctgctggcg
gtggtccggccccggacggtccacctgtttgccgccactgtgcccgcttttcatccctgg
aagctcaggcaccagttgcaggcgagctaccggccagggctgcccttcgagattctgcgg
ctttctcagcactgctgggtctcgccccggatcgtctgcgaggcgctggtggaggagcgc
ttcttagaagactggcgtcctgtgatcgatgcaaacctgcacggctggctgggggcagag
cgcctgcagttggccgagtggtaccagagccgggccgatgtgctccaggagcttctcagg
cggcctgcttcgctgttgcaaccgctggcacgctcctgtgactccctttgctga
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