Gloeobacter kilaueensis: GKIL_3879
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Entry
GKIL_3879 CDS
T02885
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
glj
Gloeobacter kilaueensis
Pathway
glj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
glj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GKIL_3879 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glj03021
]
GKIL_3879 (rpoC)
03400 DNA repair and recombination proteins [BR:
glj03400
]
GKIL_3879 (rpoC)
Enzymes [BR:
glj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GKIL_3879 (rpoC)
Transcription machinery [BR:
glj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GKIL_3879 (rpoC)
DNA repair and recombination proteins [BR:
glj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GKIL_3879 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
AGY60125
UniProt:
U5QQY3
LinkDB
All DBs
Position
4093392..4095221
Genome browser
AA seq
609 aa
AA seq
DB search
MPRMEQRFDYIKISLASPERVMAWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPSKDWECYCGKYKRVRHRGIVCERCGVEVTESKVRRHRMGYIKLAAPVTHVWYLKGI
PSYISTLLDMPLRDVEQVVYFNAYVVLNPGNAENLYYKQLLTEDQYIEVEDQLYAEGSTL
ELPEGWAKMGAEAIHELLAAIEMESDAERLREELGESKGQKRTKLIKRLRVLDNFIATGS
RPEWMVLTAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIV
RNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGR
SVIVVGPKLKLHQCGLPKEMAIELFQPFVIHKLIQRGLVNNIKAAKKMIQRNDARIWGVL
DEVITGHPVLLNRAPTLHRLGIQAFEPILVSGRAIQLHPLVCTAFNADFDGDQMAVHVPL
SLESQAEARLLMLASNNVLSPATGRPIITPTQDMVLGCYYLTVDNPDAQKGAGKFFASAD
DAIIAYNQGMIDLHAKIWLRFEGEVETDGGPDDLRVRRDAEGNVLSQYVRTTVGRVIFNQ
VVQETLVAS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggatggaacagcgttttgactacatcaagatctcgctcgcttcaccggaacgg
gtgatggcctgggggcagcgcacgttgcccaacggccaggtcgtaggtgaggtgaccaag
cccgagacgatcaactaccgcaccctcaagcccgagatggacggtctattttgcgagcgc
atctttgggccttccaaagactgggagtgttactgcggcaagtataagcgggtgcggcac
cggggcatcgtctgcgagcgctgcggcgtcgaggtgaccgaatcgaaggtgcgccgccac
cgcatgggttacatcaagctcgccgcccccgtcacccacgtctggtatctcaagggcatt
ccttcttatatttcgacgctgctcgatatgcccctgcgcgatgtcgagcaggtggtctac
ttcaacgcctacgtcgtgctcaatcccggcaacgccgagaacctctactacaagcagctg
ctcaccgaggaccagtacatcgaggtcgaggaccagctctacgccgaaggttcgaccctc
gaactccccgaaggctgggcgaagatgggcgctgaggcgatccacgaactgctcgctgcg
atcgagatggaatctgacgctgagcggctgcgcgaggagctgggcgaatcgaagggccag
aagcgcaccaagctcatcaagcgcctgcgggtgctcgacaactttattgccaccggctca
aggcccgagtggatggtgcttactgccattccggtgatcccgccggatctaaggccgatg
gtgcagctcgacggtggccgctttgccaccagcgacctcaacgacctctaccgccgggtg
atcaaccgcaacaaccgtctggcgcggctgcaggagattcttgcccctgagattatcgtg
cgcaacgaaaagcgcatgttgcaggaggcggtggacgccctgatcgacaacggtcggcgc
gggcggacggtggtcggagccaacaaccggcccctcaagtcgctctccgacatcatcgaa
ggcaagcagggccgcttccggcagaacctgctcggcaagcgcgtcgattactcgggccgc
tcggtgatcgtcgtcggccccaagctcaagctccaccagtgcgggcttcctaaagagatg
gccatcgagctgtttcagccgtttgtcatccacaagctcatccagcgcggcctggtcaac
aacatcaaggccgccaaaaagatgatccagcgcaacgatgcgcgcatctggggcgtgctc
gacgaggtgattacgggccatccggtgctactgaaccgcgctccgaccctgcatcgcctg
ggcatccaggccttcgagccgatcctcgtctccggacgggcgatccagctccatccgctc
gtctgcaccgccttcaacgccgacttcgatggcgaccagatggccgttcacgtgcccctg
tcgctcgaatcccaggcagaggccaggctcctgatgctcgcctccaacaacgtgctctca
cccgccacggggcgaccgatcatcacccccacccaggacatggtgctcggttgctactac
ctgaccgtcgataatcctgacgcccagaagggtgctggcaaattcttcgccagcgccgac
gatgcgatcatcgcctacaaccaggggatgatcgacctgcacgccaagatctggctgcgc
tttgagggcgaggtcgaaaccgacggtgggccagacgatctgcgggtgcgccgcgacgcg
gagggcaacgtgctttctcagtacgtccgcaccaccgtcggacgggtcatcttcaaccag
gttgttcaagaaacgcttgtcgccagctag
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