Glutamicibacter sp. M10: N6V40_00215
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Entry
N6V40_00215 CDS
T10283
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
glm Glutamicibacter sp. M10
Pathway
glm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N6V40_00215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glm03019
]
N6V40_00215
03400 DNA repair and recombination proteins [BR:
glm03400
]
N6V40_00215
Enzymes [BR:
glm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N6V40_00215
Messenger RNA biogenesis [BR:
glm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N6V40_00215
DNA repair and recombination proteins [BR:
glm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N6V40_00215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_IclR
Zn_ribbon_TFIIB
MRFAP1
AAA_30
HEM4
Motif
Other DBs
NCBI-ProteinID:
UXN31989
LinkDB
All DBs
Position
complement(42335..44443)
Genome browser
AA seq
702 aa
AA seq
DB search
MQVDLKTLALQKLRALVQNPEAQFHDGQYEAIEALVAERRRALVVQRTGWGKSAVYFIAS
LLLREQGYGPTLIVSPLLALMRDQVAAAERAGVRAAAINSANVLEWREILEKLQRNELDV
LLVSPERLNNPSFREQQLPMLMQRLGLLVIDEAHCISDWGHDFRPDYRRIRDLIAKLPKG
LPVLATTATANSRVVEDVAEQLAGGTEQVFTLRGTLARDSLRLGVLRLPSPRMQLAWLLS
HINDFNGSGIIYTLTVSAAEDIARLLREAGHEVAAYTGRTDLEERERLEQALKNNVVKAL
IATSALGMGFDKPDLGFVLHIGAPSSPVAYYQQVGRAGRGSVNADVLLLPGPDDSEIWEY
FATSSMPDQVRATQVLEALAGTDGAMSVPALESAVNLRRSPLELLLKVLAVDGAVERVAG
GWMRTDMPWSYDAERYKRVAQSRVHEQTLMVTYENTRGCRMQFLTEALDDPRSVPCGRCD
NCAGVWFDDHIPEDSKDSAQAALGRVGIPIEPRKLYPSGLDRLGYTLKGKIPVDEQISNG
RALARLTDLGWGNRLRQLFADPTDNPIDKPMVDACIKVLAEWNWEERPVGVVAMPSNKRP
QLITSLAQSLAEVGRLRYLGQLEYRGSGPQNGSGGNSAFRVAAVADAFELPAALEQLVSG
APGPVLLVDDLVDSRWSIAMAGRALRIAGAPGVLPFTLGVAG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggatctgaaaaccctggctctgcagaaactgcgcgctctggtgcaaaacccc
gaggcacaattccacgacggccagtatgaagcaatcgaagctttggtggccgaacgtcgt
cgtgccctggttgtacagcgcaccggttggggaaagtcagcggtctacttcatcgcatca
ctccttttgcgtgagcagggttatgggcccaccttgatcgtgtctccattgctggctctc
atgcgtgatcaggtggccgcggccgagcgtgcaggggtacgggccgccgccatcaactca
gccaacgtgctcgaatggcgcgagattcttgaaaagctgcaacgcaacgaacttgatgtg
ctgctggtgtcgccagaacgcctgaataatccatcattccgcgagcaacagctaccaatg
ctgatgcaacgactaggtctgctggttattgacgaagcccactgcatctcagactggggc
catgatttccgtcccgactatcggcgtatccgagacttgattgccaagttgcctaagggc
cttcctgttcttgccaccaccgcaactgccaacagtcgcgtcgtagaagatgtggctgaa
caactggccggcgggaccgagcaagttttcaccttgcgtggcacccttgcgcgagattca
cttcgacttggcgtactgagattgccttctccacggatgcaattggcctggttgctcagc
catatcaatgattttaacggctcaggcatcatctacacgctgaccgtttctgcagccgaa
gatattgctcgcttgttgcgcgaagctggtcatgaagtcgcggcctataccgggcgcacc
gacctagaggaacgcgaacggctagaacaagcactaaaaaacaatgtggttaaggcgctg
atcgcaactagcgcccttggtatgggctttgacaagccagacctcggatttgtgctgcac
attggcgcacccagctctccggtggcctactaccagcaggtgggtcgtgccggtcgtggc
agtgtgaatgcggatgttctattgcttcctggcccagatgactcggagatctgggagtac
tttgcgaccagttccatgccggaccaagtccgtgccacccaagtactagaagcgctagca
ggcaccgacggggcgatgagcgtgccggcgttggaaagcgcagtgaatctgcgccgttct
cctctggagctgttgctcaaggtactagcagttgatggcgcggtggaacgtgttgcaggc
ggatggatgcgcaccgacatgccgtggagctacgacgcggaacgatacaagcgtgtggcc
cagagccgggtgcacgaacaaacgctgatggtcacctacgaaaatactcgtgggtgccgc
atgcaattcttgaccgaagccttggatgatccgcgttcggtaccatgtggacgctgcgat
aactgtgccggtgtctggtttgacgatcatattcctgaagactctaaggacagcgcccaa
gcggcgctgggccgcgtgggaatcccgattgaaccacgtaagctctacccatcgggtttg
gaccgcttgggatacacgctcaagggaaaaattccggttgatgagcagatctccaatgga
cgggcattggctcgtcttaccgacctcgggtggggcaatcgactgcgtcaactatttgcc
gaccccaccgataatcccattgataagccaatggtggatgcctgcatcaaggtactagcc
gaatggaattgggaagaacggcccgttggtgtggttgccatgccgtcaaataagcggcca
caactcattacctcgttggctcagagcctggccgaggttggccggttgcgctatctaggt
cagcttgagtaccgcggctccggcccacaaaatggctccggaggtaactcggcattccgc
gttgctgcggtggcagatgcctttgaacttccagctgcgttggaacaattggtttcgggt
gcgccgggtccggttttgctcgtggatgatcttgttgattcgcgctggtcgatcgctatg
gctgggcgggctttacgaattgctggcgcgccgggtgtcctgcctttcactttgggcgta
gccgggtaa
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