KEGG   Glutamicibacter sp. M10: N6V40_00215
Entry
N6V40_00215       CDS       T10283                                 
Name
(GenBank) RecQ family ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
glm  Glutamicibacter sp. M10
Pathway
glm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:glm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N6V40_00215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:glm03019]
    N6V40_00215
   03400 DNA repair and recombination proteins [BR:glm03400]
    N6V40_00215
Enzymes [BR:glm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     N6V40_00215
Messenger RNA biogenesis [BR:glm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     N6V40_00215
DNA repair and recombination proteins [BR:glm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      N6V40_00215
SSDB
Motif
Pfam: DEAD Helicase_C ResIII RecQ_Zn_bind HTH_IclR Zn_ribbon_TFIIB MRFAP1 AAA_30 HEM4
Other DBs
NCBI-ProteinID: UXN31989
LinkDB
Position
complement(42335..44443)
AA seq 702 aa
MQVDLKTLALQKLRALVQNPEAQFHDGQYEAIEALVAERRRALVVQRTGWGKSAVYFIAS
LLLREQGYGPTLIVSPLLALMRDQVAAAERAGVRAAAINSANVLEWREILEKLQRNELDV
LLVSPERLNNPSFREQQLPMLMQRLGLLVIDEAHCISDWGHDFRPDYRRIRDLIAKLPKG
LPVLATTATANSRVVEDVAEQLAGGTEQVFTLRGTLARDSLRLGVLRLPSPRMQLAWLLS
HINDFNGSGIIYTLTVSAAEDIARLLREAGHEVAAYTGRTDLEERERLEQALKNNVVKAL
IATSALGMGFDKPDLGFVLHIGAPSSPVAYYQQVGRAGRGSVNADVLLLPGPDDSEIWEY
FATSSMPDQVRATQVLEALAGTDGAMSVPALESAVNLRRSPLELLLKVLAVDGAVERVAG
GWMRTDMPWSYDAERYKRVAQSRVHEQTLMVTYENTRGCRMQFLTEALDDPRSVPCGRCD
NCAGVWFDDHIPEDSKDSAQAALGRVGIPIEPRKLYPSGLDRLGYTLKGKIPVDEQISNG
RALARLTDLGWGNRLRQLFADPTDNPIDKPMVDACIKVLAEWNWEERPVGVVAMPSNKRP
QLITSLAQSLAEVGRLRYLGQLEYRGSGPQNGSGGNSAFRVAAVADAFELPAALEQLVSG
APGPVLLVDDLVDSRWSIAMAGRALRIAGAPGVLPFTLGVAG
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgcaagtggatctgaaaaccctggctctgcagaaactgcgcgctctggtgcaaaacccc
gaggcacaattccacgacggccagtatgaagcaatcgaagctttggtggccgaacgtcgt
cgtgccctggttgtacagcgcaccggttggggaaagtcagcggtctacttcatcgcatca
ctccttttgcgtgagcagggttatgggcccaccttgatcgtgtctccattgctggctctc
atgcgtgatcaggtggccgcggccgagcgtgcaggggtacgggccgccgccatcaactca
gccaacgtgctcgaatggcgcgagattcttgaaaagctgcaacgcaacgaacttgatgtg
ctgctggtgtcgccagaacgcctgaataatccatcattccgcgagcaacagctaccaatg
ctgatgcaacgactaggtctgctggttattgacgaagcccactgcatctcagactggggc
catgatttccgtcccgactatcggcgtatccgagacttgattgccaagttgcctaagggc
cttcctgttcttgccaccaccgcaactgccaacagtcgcgtcgtagaagatgtggctgaa
caactggccggcgggaccgagcaagttttcaccttgcgtggcacccttgcgcgagattca
cttcgacttggcgtactgagattgccttctccacggatgcaattggcctggttgctcagc
catatcaatgattttaacggctcaggcatcatctacacgctgaccgtttctgcagccgaa
gatattgctcgcttgttgcgcgaagctggtcatgaagtcgcggcctataccgggcgcacc
gacctagaggaacgcgaacggctagaacaagcactaaaaaacaatgtggttaaggcgctg
atcgcaactagcgcccttggtatgggctttgacaagccagacctcggatttgtgctgcac
attggcgcacccagctctccggtggcctactaccagcaggtgggtcgtgccggtcgtggc
agtgtgaatgcggatgttctattgcttcctggcccagatgactcggagatctgggagtac
tttgcgaccagttccatgccggaccaagtccgtgccacccaagtactagaagcgctagca
ggcaccgacggggcgatgagcgtgccggcgttggaaagcgcagtgaatctgcgccgttct
cctctggagctgttgctcaaggtactagcagttgatggcgcggtggaacgtgttgcaggc
ggatggatgcgcaccgacatgccgtggagctacgacgcggaacgatacaagcgtgtggcc
cagagccgggtgcacgaacaaacgctgatggtcacctacgaaaatactcgtgggtgccgc
atgcaattcttgaccgaagccttggatgatccgcgttcggtaccatgtggacgctgcgat
aactgtgccggtgtctggtttgacgatcatattcctgaagactctaaggacagcgcccaa
gcggcgctgggccgcgtgggaatcccgattgaaccacgtaagctctacccatcgggtttg
gaccgcttgggatacacgctcaagggaaaaattccggttgatgagcagatctccaatgga
cgggcattggctcgtcttaccgacctcgggtggggcaatcgactgcgtcaactatttgcc
gaccccaccgataatcccattgataagccaatggtggatgcctgcatcaaggtactagcc
gaatggaattgggaagaacggcccgttggtgtggttgccatgccgtcaaataagcggcca
caactcattacctcgttggctcagagcctggccgaggttggccggttgcgctatctaggt
cagcttgagtaccgcggctccggcccacaaaatggctccggaggtaactcggcattccgc
gttgctgcggtggcagatgcctttgaacttccagctgcgttggaacaattggtttcgggt
gcgccgggtccggttttgctcgtggatgatcttgttgattcgcgctggtcgatcgctatg
gctgggcgggctttacgaattgctggcgcgccgggtgtcctgcctttcactttgggcgta
gccgggtaa

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