Glutamicibacter sp. M10: N6V40_07250
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Entry
N6V40_07250 CDS
T10283
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
glm Glutamicibacter sp. M10
Brite
KEGG Orthology (KO) [BR:
glm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
glm03032
]
N6V40_07250 (topA)
03400 DNA repair and recombination proteins [BR:
glm03400
]
N6V40_07250 (topA)
Enzymes [BR:
glm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N6V40_07250 (topA)
DNA replication proteins [BR:
glm03032
]
Prokaryotic type
DNA Topoisomerases
N6V40_07250 (topA)
DNA repair and recombination proteins [BR:
glm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N6V40_07250 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Motif
Other DBs
NCBI-ProteinID:
UXN33199
LinkDB
All DBs
Position
1478761..1481520
Genome browser
AA seq
919 aa
AA seq
DB search
MESPAKVKSIAKYLGEGFDVDASVGHIRDLPQPSELPTELKKTSVGKFAVDLDNDFEPYY
MVYPDKKKRVSELKAKLKEADELYLATDADREGEAIAWHLLQVLKPKVPVRRLAFTEITK
EGISRALENMRELDTDLVDAQETRRVLDRLYGYEISPVLWRKVARGLSAGRVQSVATRLV
VERERERMAFIPAGYWDVKGNFATKEGEGFEAKLAAVDGARVASGRDFDDRGALKATRNK
LAHLDQESAQSLVTNLSDTDFAVTSVEDKPYTRRPAAPFTTSTLQQEASRKLRWSSKLTM
QIAQRLYENGYITYMRTDSVFLSQEATTAARKQATELYGADSVPAKPRVYKAKSDAAQEA
HEAIRPAGDMFRRPKDVRSSLSKDENALYELIWKRTVASQMADAKGFTATIKLQGTASDS
RVAEFSASGTVITFRGFLSAYEEGKDEQAIEAAAADAEARLPQLSVGQYLAGDELLALGH
ETSPPARYTEASIVAELEKREIGRPSTYAPTISTIMDRGYVTKRGGALVPSWIAFSVIRL
LEEHFAKYVDYDFTARLEDDLDEIAKGQRARSDWLNLFYFGKGAESESEGLKHVVDNLGD
IDARAINSIPVTDDITLRVGKFGPYLERAIPEGAEEGTEPQRANVPEDLAPDELTAQKAE
ELFATSQVSENELGTDPETGRAIVAKDGRYGAYVTEIIPEPTAEDLAAQPVEYYKNGKPK
PPKKPVKLKPRTASLFKSMTVETVTLDDALKLMSLPRVLGADAEGEEITVQNGRFGPYLK
KGSDSRSIESEDQIFTITLDEALEIYSQPKQRGRRAAVPPLAEFGADPTSEKNIVVKDGR
FGPYITDGITNITVPRGTSLEELTREQAIELLADKRARGPVKRTAKKAPAKKAPAKKATA
KKAPAKKTTTKKTTAKKTD
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctcctgccaaggtgaagtcgatcgccaagtatttgggcgagggctttgacgtt
gatgcatcggtggggcacattcgcgatcttccacagccatcagaactaccaaccgagttg
aagaagacgtcggtgggcaagtttgctgttgatttggataatgactttgagccttactac
atggtctatccagacaagaaaaagcgcgtttcagaactgaaagccaagcttaaagaagct
gacgaactttacctcgcaaccgatgcggaccgcgaaggcgaagccatcgcgtggcacctg
ttgcaggtgcttaagcccaaagttccagtacgtcgtctggccttcaccgaaatcaccaag
gaaggtatttctcgcgcactggaaaacatgcgcgagttggataccgacctcgttgatgcc
caggaaacccgtcgtgttttggaccgtctgtacggttacgagatctcgccggtactgtgg
cgcaaggtagctcgtggcctgtctgcaggtcgtgtgcagtctgtggctactcgtctggtt
gttgagcgtgaacgcgaacgtatggcgttcatcccggctggatactgggacgtgaaaggc
aactttgccactaaagaaggcgaaggcttcgaagcgaagctcgctgccgttgacggcgcc
cgcgtggcctcgggccgtgactttgatgaccgcggtgcactaaaggcaactcgcaacaag
ctcgctcacctggatcaagaatcggctcagtcgctggttaccaatctttccgacactgac
tttgctgtcacctcggttgaagataagccgtacacacgtcgtccggccgcaccatttacc
acttccacgttgcagcaggaagcctcgcgcaagttgcgctggagctccaagctgaccatg
cagatcgctcagcgcctgtatgaaaacggttatatcacctacatgcgtacggactcggtc
ttcctctcgcaggaagcaaccaccgccgcacgcaagcaggccaccgaactttatggtgcc
gactcggtgccagccaagccacgtgtttacaaggccaagtccgatgctgcacaggaagct
cacgaagcgatccgtccagccggtgacatgttccgtcgtcccaaggatgtgcgttcctcg
ctgtccaaggatgaaaacgcactctacgagctgatctggaagcgcaccgttgcttcgcag
atggcagatgccaagggcttcaccgccaccatcaagcttcagggcaccgctagtgatagc
cgcgttgctgaattctcagcctctggtaccgtgattaccttccgcggattcctttcggcc
tacgaagaaggcaaggatgagcaggctattgaagctgctgccgctgacgctgaggcacgc
ctgccacagctgagtgtcggacagtacttggcaggagatgagcttctggccttgggccac
gaaacttccccgccagcacgctacaccgaagcctcgattgttgctgagctggaaaagcgc
gaaattggtcgcccttcaacctacgcaccaacaatctccaccatcatggatcgtggctac
gtcaccaagcgtggcggagctttggttcctagctggattgccttctctgttattcgtttg
ctcgaagagcattttgctaagtacgttgactacgatttcaccgcacggttggaagatgac
ctcgacgagatcgccaagggtcagcgcgctcgtagcgattggctgaacctgttctacttc
ggcaagggcgcagagtctgaatccgaaggcctgaagcatgtagtcgataacctcggtgac
attgatgcgcgcgccatcaactccatcccagtcactgatgacatcaccttgcgtgtgggc
aagttcggtccttaccttgaacgtgccatcccggaaggtgctgaagaaggtaccgagcca
cagcgcgccaacgtgcctgaagatttggcaccggatgagctgactgcacagaaggctgaa
gagctctttgctacctcgcaggtctcggaaaacgaactgggcactgacccagaaacgggc
cgtgcgattgtggccaaggacggtcgctatggcgcctatgtcacggagatcattccagag
ccaacggccgaagatttggctgctcagcctgtggagtactacaagaatggcaagcctaag
ccacctaagaagccggtcaagcttaagcctcgcaccgcttcactattcaagagcatgacc
gttgagacggtgaccttggatgatgcgttgaagctgatgagcttgccacgcgtgctgggt
gcagatgctgagggtgaagagatcaccgtacagaacggtcgctttggtccatacctgaag
aagggtagcgattcgcgctcaattgagagcgaagatcagatcttcaccatcactttggat
gaagctctggagatctactcgcagccaaagcaacgtggtcgccgcgctgctgttccgcca
ctggcagagttcggtgcggatccgacaagcgaaaagaacatcgtggtcaaggatggtcgt
ttcggtccttatatcaccgatgggattaccaacatcaccgttccgcgaggaacgtcgttg
gaggagctgactcgcgagcaggctatcgaattgctggcagacaagcgcgcccgcggcccg
gtaaaacgtaccgcgaagaaggcgccagcgaagaaggctccggccaagaaagccaccgcc
aagaaggcgccagcaaagaagactacgaccaaaaagacgaccgcaaaaaagactgattag
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