Glaciihabitans sp. INWT7: F1C58_02295
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Entry
F1C58_02295 CDS
T06751
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gln
Glaciihabitans sp. INWT7
Brite
KEGG Orthology (KO) [BR:
gln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gln03032
]
F1C58_02295 (topA)
03400 DNA repair and recombination proteins [BR:
gln03400
]
F1C58_02295 (topA)
Enzymes [BR:
gln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F1C58_02295 (topA)
DNA replication proteins [BR:
gln03032
]
Prokaryotic type
DNA Topoisomerases
F1C58_02295 (topA)
DNA repair and recombination proteins [BR:
gln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1C58_02295 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Extensin_1
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QNE45853
UniProt:
A0A7G6Z538
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All DBs
Position
461902..464796
Genome browser
AA seq
964 aa
AA seq
DB search
MPGTKKLVIVESPAKAKTIAQYLGDGYEVLASVGHIRDLIEPKNLPPELKKGSLGKFSID
VENGFQPYYVVSDQKKKTVAELKRALKGADELYLATDEDREGEAIAWHLLDELKPKVPVK
RMVFHEITKEAIERARDNTRDIDTALVDAQETRRILDRLYGYEISPVLWRKVGPGLSAGR
VQSAATRLVVDRERERLAFVAAGYWDLSALLAASDSSSPFESRLARLDGVRVATGRDFDD
KGQLKASTNGKADAVALDEQAATSLAEALRDPAVPVIVSSVDSKPYTRRPAAPFSTSTLQ
QEAARKLRFSARQTMSVAQGLYENGYITYMRTDSLNLSQQAMSAARSQAASLYGAESVSE
KPRTYASKSKNAQEAHEAIRPAGDTFRTPSQLEGTLRGNDWKLYDLIWKRTVASQMADAK
GMTASVVITAGPVQGTTMAEFAASGTVITFRGFLQAYEESRDEERNDAAEPAEAKLPPLT
VGQKLTVADVEAKGHETSAPPRYTEASLVKTLEELGIGRPSTYASIISTIIDRGYVTPRG
TALVPNWIAFSVVRLLEEFFSDLVEYHFTAGMEDDLDRIADGKEDRVDWLNSFYFGSEKH
RGLRSVIDNLGEIDAKSINSIKLDDEVTLRIGKYGPYLEVVDEDAAPEATPRRVNIPPEL
APDELTIVKAHELIDAPVVVDRVIGVNPENGKNVVAKDGRFGPYITEVDPEPAAEAVETP
AAEPVVDPATGEIIEPKKKRAAPKKAAAVKPRTASIFKSMDLATVDIDTALRLLSLPRIV
GQDPESGEEITAQNGKFGPYLKKGADTRSLTEEDQIFEIDLAGAIELYAQPKYGARRASS
ALKEFDADPESGKPIRIKDGRFGAYVTDGVTNVTIPRGETIEEIDFERAVQMLADKRAKG
PTVKKTAAKKPAAKKPAVKKPVAKKPTVKKAVAKSAVAAKPAVKKPVAKRPVAAKPPVTT
ESAQ
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
gtgcctggcacgaagaagctggtcatagtcgagtcgcccgcaaaggcgaagacgattgcc
cagtacctgggcgacggatacgaggtgctggcctcggtcggtcacatccgcgacctgatc
gagccgaaaaacctgccgccggagctcaaaaaggggtctctcggcaagttctccatcgat
gtcgaaaacggcttccagccctattacgtcgtgtcggaccagaagaagaagacggtcgcc
gaactgaagcgcgcgctcaagggcgccgacgagctctacctcgcaactgatgaggaccgc
gagggtgaggccatcgcgtggcacctgctcgacgagctcaagcccaaggtgccggtcaag
cgcatggtgttccacgagatcaccaaagaagcgatcgaacgtgcccgcgacaacacccgt
gacatcgacaccgctctcgtcgacgcgcaggagacccggcgcatcctcgatcgtctctac
ggctacgagatctcgccggtgctgtggcgcaaagtcggccccgggctctccgccggtcgc
gtgcagtccgccgccacccgactcgtcgtcgaccgggagcgcgaacgcctcgccttcgtc
gcggccggctactgggatctctcggcgctgctcgcggcatccgattcctccagcccgttc
gaatcccgtctcgcccgcctcgacggggttcgcgtggccaccggccgcgacttcgacgac
aagggtcagctaaaagcatccacgaacggcaaggcggatgccgtggcgctcgatgagcag
gcggccacctccctcgccgaagcgttgcgcgaccccgctgtgccggtgatcgtctcgtcg
gtcgactccaagccctacactcggcgcccggcggcgccattcagcacctccacgctgcag
caggaggccgcgcgcaagctgcgtttctccgctcgccagacgatgagtgttgcgcagggg
ctgtacgaaaacgggtacatcacctacatgcgtaccgactcgctcaacctgtcgcagcag
gcgatgtctgccgcccgcagccaggcggcatccctctacggcgcggagagcgtctccgag
aagccgcggacctacgccagcaagagcaagaacgcccaggaagcgcacgaggcaatccgg
ccggccggggacaccttccgcactccgtcccagctcgagggaaccctgcggggcaacgac
tggaagctgtacgacctcatctggaagcgcacagtcgcgtcgcagatggccgacgccaag
ggcatgaccgcgtccgtcgtcatcaccgccggtcccgtgcagggcacgacgatggccgag
ttcgcggcgagtggcacggtcatcaccttccgcggattccttcaggcctacgaggagagc
cgggacgaggagcgcaacgacgccgccgagcccgccgaggcgaaactgcctccgctcacg
gtcggccagaaactgaccgtcgcggatgtcgaggccaagggccacgagaccagcgcgccg
ccccgttacaccgaggcgagcctcgtgaagactctcgaagagttggggatcgggcgcccg
tccacttatgcgtcgatcatctcgaccatcatcgaccgcgggtacgtcaccccgcgcggc
accgccctggtgccgaactggatcgccttctcggtcgtacggctgctcgaggagttcttc
tccgacctggtggagtaccacttcaccgcgggcatggaggatgacctcgaccgcatcgcc
gacggcaaggaagaccgggtcgactggctcaacagtttctatttcggcagcgagaagcac
cgcggcttgcgcagcgtcatcgacaacctcggtgagatcgatgcgaagagcatcaactcg
atcaagctcgacgacgaggtcacgctgcgcatcggcaagtacggtccctacctcgaagtc
gtggatgaggatgccgcccccgaggcgacaccgcgccgcgtgaacatcccgccggagctc
gccccggacgagctcaccattgtgaaggcccatgagctgatcgatgcgccggtcgtggtg
gatcgggtgatcggggtcaaccccgagaacggcaagaacgtcgtcgcgaaggacggtcgt
ttcggtccgtacatcaccgaggtggatcccgaacccgccgctgaggcagtcgagactccg
gcagccgagccggttgtcgatcccgccaccggcgagatcatcgagccgaagaagaagcgg
gccgcgccgaagaaggcagcggcggtgaagccgcgcaccgcatccatcttcaagtccatg
gatctcgcgaccgtcgatatcgacacggcgcttcgcctgctctccctgccccgcatcgtc
ggccaggaccccgagagcggcgaggagatcaccgcccagaacggcaagttcggtccgtac
ctcaagaagggcgccgataccaggtcgctcaccgaagaggaccagatcttcgagatcgac
ctcgccggggcgatcgagttgtacgcccagccgaagtacggcgcgcgccgggcatccagt
gcgctcaaggagttcgatgccgaccccgagagcggaaagccgatccgtatcaaagacggg
cgtttcggcgcctacgtcaccgacggcgtcaccaatgtgacgattccgcgcggtgagacg
atcgaggagatcgacttcgaacgcgccgtgcagatgctcgccgacaagcgcgcgaagggc
ccgacggtcaagaagaccgcggccaagaagccggcggccaagaagccggcagtcaagaag
cccgtcgccaagaagcccaccgtgaagaaggccgtcgcgaaaagcgctgtcgctgcgaag
ccggccgtgaagaagccggtagcgaagaggccggtcgcggcgaaaccgcccgtgaccaca
gagtccgcgcagtag
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