Glaciihabitans sp. INWT7: F1C58_09720
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Entry
F1C58_09720 CDS
T06751
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
gln
Glaciihabitans sp. INWT7
Pathway
gln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1C58_09720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gln03019
]
F1C58_09720
03009 Ribosome biogenesis [BR:
gln03009
]
F1C58_09720
Enzymes [BR:
gln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
F1C58_09720
Messenger RNA biogenesis [BR:
gln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F1C58_09720
Ribosome biogenesis [BR:
gln03009
]
Prokaryotic type
rRNA processing factors
F1C58_09720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
QNE47149
UniProt:
A0A7G6Z8T4
LinkDB
All DBs
Position
complement(2005234..2008035)
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AA seq
933 aa
AA seq
DB search
MVETTTNNNDGSAQNEPKKRSRLFGSRRASKATAAPEPAADVQPVKAPEPAAAASQPAAS
AAPQSDAAPATVAAPRQAKAEQPQGAAGSDAAAATSEAPAKRAPARRPAAKQDAVKSDDS
TGEKATEPTPAATKKAPIARPTTSLLFQAPDLPVLPPRPDRDDDFDDEPRDNTRSSRNSR
NSRNDRSNDRSNDRNDDRNTDRDQRDDDGEQTTLRRRSRRRAGDEDRDSSGGNSGNSNPT
NTVVKVRTPRPAPELSNEPTKVRGSTRLEAKKQRRRDGRDAGRRRPVITEAEFLARRESV
DRKMVVRSKFNRIQIGVLEDGVLVEHYVAKAADASLIGNVYLGRVQNVLPSMEAAFVDIG
RGRNAVLYSGEVDWEAAAENSADGKSQARRIELALKPGDKVLVQVTKDPVGHKGARLTSQ
VSLPGRYLVYVPNGSMNGISRKLPDTERARLKKILKEVLPENVGVIVRTAAEGATDEQLT
LDVNRLTAQWAAISATLETVQAPALLHSEPDLLVKIVRDVFNEDFHELVIEGEDAEATIK
TYLSQVAPDLVDRLKTYEGTVDSFDEYRITEQIEKALDRKVWLPSGGSLVIDRTEAMTVV
DVNTGKFVGSGGNLEETVTKNNLESAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDLVLR
RLVECLSRDRTKHQVAEVTSLGLVQMTRKKLGLGLIESFSEPCEFCAGRGIIIHHDPVVR
HRQSAQPETPRRGRGKGGNGNGNNDSGRSNGSSNNSSSATQKPNGGTHAITDDVKNALAQ
IAASTIAHAHVDEPAAVVSEARAEDVAASAVATEAAPAAAVDSAQVEAVTIAAAEAAVEI
LDIPVKKNSRGPRRISTHDAEQILDSVLDALPEPKQPGQGRSRVSRRASSAGTVRTTEQS
EQSEGSEQSEGSAQSEGSAQSEGSAQSEGSAQE
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggtggagacaactacaaacaacaacgacggttcggcccagaacgaaccgaagaagcgt
tcgcgcctcttcggctcacgtcgggcctcaaaggccacggccgctccggaaccggctgct
gacgttcaaccggtgaaagctccggaacccgcagcggcggcctcgcagccggcggcatct
gccgctccccagtccgatgcagcgccggccacagtggcggctccccggcaagcgaaggcc
gagcagccccagggtgcagcgggcagcgacgccgcagcggcgacctccgaggccccggcc
aagcgcgctccggcccgccggcccgcggcgaagcaggatgccgtgaagtccgacgattcg
actggcgagaaggcgaccgagccgacgcccgccgcgacgaagaaggcgccgatcgcgcgc
ccgaccacgtccctgctcttccaggcgcccgacctgccggtgctcccaccgcggccggac
cgggacgacgacttcgacgacgagccgagagacaacaccaggtcgtcacgcaattcgcgt
aacagccgcaacgatcgaagcaacgaccgaagtaacgaccgaaacgacgatcgcaacact
gaccgcgaccagcgggacgacgacggagagcagacgacgctgcgccgccgttcacgccgt
cgtgccggggatgaagaccgcgattcgagcggtggcaactcgggcaactccaacccgacc
aacaccgtcgtcaaggtgcgcactccccgcccggcgccagaactcagcaacgaaccgacc
aaggtgcgtggctccacccgcctcgaagccaagaagcagcgccggcgcgacggacgcgac
gccggtcgccgccgcccggtcatcacggaagccgaattccttgcccgccgggagagcgtc
gatcgcaagatggtcgtgcgctccaagttcaaccgcatccagatcggcgtgctcgaagac
ggcgtgctggtggagcactacgtggccaaggccgcagacgccagcctcatcggcaacgtc
tacctcggtcgcgtgcagaacgtgcttccgagcatggaggctgccttcgtcgacatcggg
cgcggtcgcaacgccgtgctctactccggcgaggtcgactgggaggccgccgcggagaac
tccgccgacggcaagagccaggcccgacgcatcgagctcgccctcaagccgggcgacaag
gtgctcgtgcaggtgacgaaggatccggtcggccataagggcgcccgtctcaccagccag
gtcagcctgccaggtcgctacctcgtgtatgtgcccaacggctcgatgaacggcatcagc
cgcaagctccccgacacagagcgcgctcgtctcaagaagattctcaaagaggtgctcccc
gagaatgtcggtgtcatcgtgcgaaccgctgccgaaggcgccaccgacgagcagctcacc
ctcgacgtcaaccgtctcaccgcccagtgggccgcgatcagcgccacccttgagacggtg
caggctcctgccctgctgcacagcgagcccgacctgctggtcaagatcgtgcgcgacgtc
ttcaacgaggacttccacgagctggtcatcgagggcgaggatgccgaagccacgatcaag
acctacctctcgcaggtggcccccgatctcgtcgaccgtctcaagacctacgaaggcacc
gtcgactcgttcgacgagtaccgcatcaccgagcagatcgagaaggctctcgaccgcaag
gtatggctgccgtcgggtggttcgctggtcatcgaccgcaccgaagccatgaccgtcgtc
gacgtcaacaccggcaagttcgtcggctcgggcggaaacctcgaagagacggtcacgaag
aacaacctcgagtcggcggaagagatcgtgcgccagttgcgtctgcgcgatatcggcggc
atcatcgtcgtcgacttcatcgacatggtgctcgagtcgaaccgcgacctggtgttgcgt
cggctcgtcgagtgcctgagccgcgaccgcaccaagcaccaggtggccgaggtcacctcg
ctcgggctcgtgcagatgacgcgcaagaagctggggctcggcctcatcgagtcgttcagc
gaaccctgcgagttctgtgcgggacgcggcatcatcatccatcacgacccggtagtgcgt
caccgccagtcggcccagcccgagacgccccgtcgcggacgcggcaaaggcggcaacggc
aacggcaacaatgattccgggcgctccaacggatcgtcgaacaatagttcgtcggccacg
cagaagcccaacggtggaacgcacgccatcaccgacgacgtgaagaacgccctcgcccag
atcgctgcctccaccatcgcgcacgcgcacgtcgacgagcccgcagccgtggtctccgag
gctcgggccgaggatgtcgcggcatccgcggtcgccaccgaggccgctccggcagccgct
gtcgattctgcccaggtcgaggccgtcaccatcgcggcggccgaggccgccgtcgagatc
ctggacatcccggtcaagaagaactcgcggggaccgcgacgcatctccacccacgatgcc
gagcagatcctcgattcggtgctcgatgcccttcccgagccgaagcagccggggcagggg
cgctcacgcgtctctcgccgtgcctccagcgccggtaccgttcgaaccaccgagcagtcc
gagcagtccgagggttccgagcagtccgagggttccgcgcagtccgagggttccgcgcag
tctgagggttccgcgcagtctgagggttccgcgcaagagtag
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