Glaciihabitans sp. INWT7: F1C58_13345
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Entry
F1C58_13345 CDS
T06751
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
gln
Glaciihabitans sp. INWT7
Pathway
gln03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
F1C58_13345
09124 Replication and repair
03420 Nucleotide excision repair
F1C58_13345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gln03021
]
F1C58_13345
03400 DNA repair and recombination proteins [BR:
gln03400
]
F1C58_13345
Enzymes [BR:
gln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1C58_13345
Transcription machinery [BR:
gln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
F1C58_13345
DNA repair and recombination proteins [BR:
gln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
F1C58_13345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
QNE48524
UniProt:
A0A7G6ZCQ9
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All DBs
Position
2778734..2780392
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AA seq
552 aa
AA seq
DB search
MSGPLIVQSDRTVLLEVAHPAAEDARHDLAVFAELERAPEHIHTYRITRLGLWNARAAGH
TAENMLDTLEKYSKFPIPQSVSIDIAETVGRYGRLVIERDENGTLMLRSTDAAVLSEIVR
AKRIAPLLFLPEDQRGKGPAIDRYRIQAWARGQVKQELVKLGWPAEDLAGYTPGTPHPIA
LDTSEWNLREYQNHAVSSFVDGGSGVVVLPCGAGKTLVGAGAMARVETTTLILVTNTVSA
RQWRAELLKRTTLTEDEIGEYSGQVKEVKPVTIATYQILTAKRKGEYAHLALLDALDWGL
VIYDEVHLLPAPVFKLTAELQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEA
QGFISPASCFEVRIDLPPQERLEYAASADDERYRLAATAPAKLQVVRDLVKKHAGERILV
IGQYLDQIDTLAEVLDAPKLTGSTPIEERERLYQAFREGEITVLVVSKVANFSVDLPEAT
VAIQVSGSFGSRQEEAQRLGRLLRPKESGLPANFYTLVARDTVDQDFAQNRQRFLAEQGY
SYTILDGDQIAA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
ctgtctggacccctgatcgtgcagagcgaccgcaccgtgttgctggaggtcgcgcacccc
gccgctgaggatgcccgccacgacctcgccgtcttcgccgaactcgagcgcgcacccgag
cacatccacacgtatcgcatcacccgcctcggcctctggaacgcgcgcgcggccggtcac
accgccgagaacatgctcgacacgctcgagaagtactccaagttccccatcccccagagc
gtctccatcgacatcgccgagaccgtgggccgctacggccggctcgtcatcgagcgcgac
gaaaacggcactctcatgctgcgctcgacggatgctgcagtgctgagcgagatcgtgcgg
gccaagcgcatcgcccccctgctcttcctcccggaggaccagcgcggcaagggtccggcg
atcgaccgttaccggatccaggcctgggcgcgcggacaggtgaagcaggagctggtcaag
ctcggctggccggcggaggacctcgccgggtacaccccgggcacgccgcatccgatcgcg
ctggataccagcgaatggaacctgcgcgagtaccagaaccacgccgtgtcgagcttcgtg
gacggcggatcgggagtcgtcgtactgccctgtggcgcgggcaagaccctcgtcggcgcc
ggcgcgatggcgagggtcgagaccacgacgttgatcctcgtgaccaacaccgtctcggcg
cggcagtggcgggccgagctgctgaagcgcacgaccctcaccgaggacgagatcggcgag
tactcgggtcaggtcaaagaggtgaagcccgtcaccatcgcgacgtaccagatcctcacg
gccaagcggaaaggcgagtacgcccacctcgccctgctcgacgccctggactggggactg
gtgatctacgacgaggtgcaccttttaccggcccccgtcttcaagctcaccgcagagttg
caggcgcgacgccgcctcggcctcaccgccaccctcgtgcgcgaggacggtcgcgagggg
gatgtcttcagcctcatcggccccaagcggttcgacgctccgtggaaggagatcgaggcc
cagggcttcatctctccggcctcgtgcttcgaggtgcgcatcgacctgcccccgcaggag
cggctcgagtacgcggcctccgccgacgacgagcgctaccggctcgcggcgaccgcgccg
gccaagctccaggtcgtgcgcgacctggtgaagaagcatgcgggagagcggattctggtg
atcgggcagtacctcgaccagatcgacactctcgccgaggttctcgacgcgccgaaactc
accggatcgacgccgatcgaggaacgcgaacggctctatcaggcattccgcgagggcgag
atcaccgtgctcgtggtctcgaaggtcgccaacttctctgtagacctgcccgaggcgacc
gtggccatccaggtctccggcagcttcggatcgcgccaggaggaggcccagcgcctcggg
cgacttctccgccccaaggagagcgggctccccgccaacttctacacgctggtcgcgcgc
gacaccgtcgaccaggacttcgcgcagaaccgtcagcgcttcctcgcggagcagggctac
agctacacgatcctggacggcgaccagatcgcggcttga
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