Trichlorobacter lovleyi: Glov_0021
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Entry
Glov_0021 CDS
T00708
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
glo
Trichlorobacter lovleyi
Pathway
glo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Glov_0021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glo03019
]
Glov_0021
Messenger RNA biogenesis [BR:
glo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Glov_0021
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B
Lactamase_B_3
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ACD93759
UniProt:
B3E8Q6
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All DBs
Position
complement(21281..22549)
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AA seq
422 aa
AA seq
DB search
MKFTIHRGSHEIGGTCIRISTETISILLDAGLPLAANSQPLTEADLAADALIISHSHQDH
CGLLDTIPSSMPVYIGKVAKGLLNATRLFLGHPLLANDFRTIDAWLPFSVGDITITPYLM
DHSATDAYGFIVEAEGKRLFYTGDFRGHGRKSVLFEKLLNKPPQNIDLMLMEGTMLQRDN
SSFSDEKSVETEIANILRKQRNISFLISSSQNIDRIVSAYRACKFTGKTLVLDIYSAWVL
EQVRQVSQGTPTIDWDSIGVVFDKRKSSVLFDPANRGMFGDFINQAVSNRIKGGELRTHP
AKYLMLLKVSSASLIFKFACEEEPTTVIYSQWQGYLAPKPEEAIHTQVMRSIKDEVRPGV
RYVYAHTSGHAPVEDLQRLVKAVKPRQLVPVHTEFPADYEFYFGNCLMVNDGTEYDLGSN
NL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccatccaccgtggcagccatgaaataggtggaacctgtatccgtatcagt
acagagacaatcagtatcctgctggatgcaggtcttcccttggcagctaatagccaaccg
ctgaccgaagctgatctggcggctgatgcgctgataatcagccactctcaccaagatcac
tgtggactgcttgacacgataccctcatccatgccggtatacataggcaaagttgccaaa
ggtttgctcaacgccaccagattattcttgggacacccgctattagcaaacgattttaga
accattgatgcttggctacctttcagtgtcggggatattacaatcaccccctatctgatg
gaccattccgcaacagatgcctacggatttattgtcgaagccgaagggaagcgtttattc
tatacaggggacttccggggccatggccgcaagtctgtactgtttgaaaagctgctcaat
aaacctcctcaaaatatagatctaatgctgatggaaggcaccatgctgcagcgtgataac
agcagcttttctgatgaaaaatcagtggaaactgaaattgcaaacatcctcagaaagcag
cgcaacatttctttccttatttcttcttcacagaatatagatcgtattgtctctgcttac
cgtgcatgcaaattcactggcaaaaccctggtactggatatctattcagcttgggttttg
gagcaggtacgacaagtttcccaaggtacgccaaccatcgactgggattctataggcgtg
gtatttgataagaggaagtcgtcagttctgtttgacccggcaaaccgagggatgttcggt
gactttataaatcaggctgtttcaaacagaattaaaggaggcgagctgcgaacacatccg
gccaagtatcttatgctgctaaaagtatcgtcagccagcttaatatttaaatttgcatgc
gaggaagagcccacaacggtgatctactctcagtggcaggggtatctagctcccaagccg
gaagaagccatacatacccaagtcatgcgttcaattaaggatgaagtgcgcccgggtgtt
cggtatgtctatgcccacaccagcggtcacgccccggttgaagatctgcaacgccttgtc
aaagcagttaagccacgccaattggttcctgttcacactgaattccctgcagattatgag
ttttattttggcaactgtctgatggttaacgacgggactgaatacgatctcggtagcaat
aatctgtaa
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